RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 CDH22Q9UJ99 828 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 BARX2Q9UMQ3 279 aaPredicted RBP13.22□□□□□ -0.29
SRSF4-204ENST00000489898 LZTS1Q9Y250 596 aa13.22□□□□□ -0.29
SRSF4-204ENST00000489898 MYO10Q9HD67 2058 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 A0A087WWV3 80 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 TSPAN1O60635 241 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 XBP1P17861 261 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 LAG3P18627 525 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 IBSPP21815 317 aaPredicted RBP13.21□□□□□ -0.29
SRSF4-204ENST00000489898 GLRA2P23416 452 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 ARL2P36404 184 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 RFC5P40937 340 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 UBE3AQ05086 875 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 COASYQ13057 564 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 SMAD4Q13485 552 aaKnown RBP13.21□□□□□ -0.29
SRSF4-204ENST00000489898 CLUL1Q15846 466 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 ODR4Q5SWX8 454 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 KCNT2Q6UVM3 1135 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 MRPL10Q7Z7H8 261 aaKnown RBP13.21□□□□□ -0.29
SRSF4-204ENST00000489898 RNF168Q8IYW5 571 aaPredicted RBP13.21□□□□□ -0.29
SRSF4-204ENST00000489898 BSNDQ8WZ55 320 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 SUSD6Q92537 303 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.29
SRSF4-204ENST00000489898 CEP170P1Q96L14 293 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 NAP1L4Q99733 375 aaKnown RBP13.21□□□□□ -0.29
SRSF4-204ENST00000489898 GCOM2Q9BZD3 368 aaPredicted RBP13.21□□□□□ -0.29
SRSF4-204ENST00000489898 ZSWIM4Q9H7M6 989 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 TLR9Q9NR96 1032 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 DNAJB4Q9UDY4 337 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.29
SRSF4-204ENST00000489898 PIN4Q9Y237 131 aaKnown RBP13.21□□□□□ -0.29
SRSF4-204ENST00000489898 WDR87Q6ZQQ6 2873 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 OFD1O75665 1012 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 EOMESO95936 686 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRSF4-204ENST00000489898 U2AF2P26368 475 aaKnown RBP eCLIP13.2□□□□□ -0.38e-16■■■■□ 19.4
SRSF4-204ENST00000489898 NRIP1P48552 1158 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 PTENP60484 403 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 IL17AQ16552 155 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 CDCA2Q69YH5 1023 aaPredicted RBP13.2□□□□□ -0.3
SRSF4-204ENST00000489898 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 CATSPER3Q86XQ3 398 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 GSTCDQ8NEC7 633 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 EIF2AQ9BY44 585 aaKnown RBP13.2□□□□□ -0.3
SRSF4-204ENST00000489898 ZBP1Q9H171 429 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 FOXP1Q9H334 677 aaPredicted RBP13.2□□□□□ -0.3
SRSF4-204ENST00000489898 NRDE2Q9H7Z3 1164 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 GPRC5CQ9NQ84 441 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 CHST12Q9NRB3 414 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 MARCH5Q9NX47 278 aa13.2□□□□□ -0.3
SRSF4-204ENST00000489898 COL4A2P08572 1712 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 FRYLO94915 3013 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 PI4K2BG5E9Z4 385 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 B4GALT5O43286 388 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
SRSF4-204ENST00000489898 DDHD2O94830 711 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 POLGP54098 1239 aaPredicted RBP13.19□□□□□ -0.3
SRSF4-204ENST00000489898 SYCE2Q6PIF2 218 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 TMEM184AQ6ZMB5 413 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 ZNF280BQ86YH2 543 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 PIGOQ8TEQ8 1089 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
SRSF4-204ENST00000489898 SLC7A3Q8WY07 619 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 C8orf76Q96K31 380 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 NFKBIZQ9BYH8 718 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 S1PR5Q9H228 398 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 CXCL16Q9H2A7 254 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 ANKEF1Q9NU02 776 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 PCDHA12Q9UN75 941 aa13.19□□□□□ -0.3
SRSF4-204ENST00000489898 F8W810 466 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 PER2O15055 1255 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 HOXA2O43364 376 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 MCM7P33993 719 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 TXKP42681 527 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 SLC11A1P49279 550 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 BCAR1P56945 870 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 DSC1Q08554 894 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 ORC2Q13416 577 aaPredicted RBP13.18□□□□□ -0.3
SRSF4-204ENST00000489898 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
SRSF4-204ENST00000489898 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 XKR9Q5GH70 373 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 PLPP4Q5VZY2 271 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 ADHFE1Q8IWW8 467 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 GJD3Q8N144 294 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 IGSF22Q8N9C0 903 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 LRRC15Q8TF66 581 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 MTRQ99707 1265 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 LRFN3Q9BTN0 628 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 MMTAG2Q9BU76 263 aaKnown RBP13.18□□□□□ -0.3
SRSF4-204ENST00000489898 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 PRKAG3Q9UGI9 489 aa13.18□□□□□ -0.3
SRSF4-204ENST00000489898 PCDHB2Q9Y5E7 798 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms