RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 HPDP32754 393 aaPredicted RBP10.65□□□□□ -0.7
NOD1-208ENST00000489614 ICAM3P32942 547 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 TUBB4BP68371 445 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 DNERQ8NFT8 737 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 GSDMAQ96QA5 445 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 RIT2Q99578 217 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 PTPN18Q99952 460 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 EHMT1Q9H9B1 1298 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 C2CD2Q9Y426 696 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
NOD1-208ENST00000489614 PFASO15067 1338 aa10.65□□□□□ -0.71
NOD1-208ENST00000489614 MGRN1O60291 552 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 OPA1O60313 960 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 PPP1R37O75864 691 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 ARP10275 920 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 ALAS1P13196 640 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 CDC25AP30304 524 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 COPB2P35606 906 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 STAT3P40763 770 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 ABL2P42684 1182 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 CD151P48509 253 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 PTGISQ16647 500 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 NUGGCQ68CJ6 796 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 CCNI2Q6ZMN8 369 aaPredicted RBP10.64□□□□□ -0.71
NOD1-208ENST00000489614 RNF207Q6ZRF8 634 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 RAD54LQ92698 747 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 EML1O00423 815 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 IKBKBO14920 756 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 MED24O75448 989 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 STAM2O75886 525 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 RPA1P27694 616 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 TXKP42681 527 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 SLC12A3P55017 1021 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 MYL5Q02045 173 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 IFFO1Q0D2I5 559 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 ITGB3BPQ13352 177 aaPredicted RBP10.64□□□□□ -0.71
NOD1-208ENST00000489614 TBC1D1Q86TI0 1168 aaPredicted RBP10.64□□□□□ -0.71
NOD1-208ENST00000489614 HHIPL1Q96JK4 782 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 MOV10L1Q9BXT6 1211 aaKnown RBP10.64□□□□□ -0.71
NOD1-208ENST00000489614 NFASCO94856 1347 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 KDM3AQ9Y4C1 1321 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 PPP1R3GB7ZBB8 358 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 GTF2A2P52657 109 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 CCDC15Q0P6D6 951 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 BAATQ14032 418 aaPredicted RBP10.64□□□□□ -0.71
NOD1-208ENST00000489614 Q3C1V9 767 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 SPECC1LQ69YQ0 1117 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 MTHFD1LQ6UB35 978 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 GALNT15Q8N3T1 639 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 AGAP11Q8TF27 550 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 DNAJC19Q96DA6 116 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 CYFIP2Q96F07 1278 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
NOD1-208ENST00000489614 IWS1Q96ST2 819 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 PCMTD2Q9NV79 361 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 PCDHA2Q9Y5H9 948 aa10.64□□□□□ -0.71
NOD1-208ENST00000489614 GOLGA6L10A6NI86 522 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 BTBD19C9JJ37 291 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 RHOBTB3O94955 611 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 MATR3P43243 847 aaKnown RBP eCLIP10.63□□□□□ -0.71
NOD1-208ENST00000489614 BLMHQ13867 455 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 PRR16Q569H4 304 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 DYDC1Q8WWB3 177 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 IQCGQ9H095 443 aaKnown RBP10.63□□□□□ -0.71
NOD1-208ENST00000489614 OCEL1Q9H607 264 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 PANK4Q9NVE7 773 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 LRWD1Q9UFC0 647 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 PCDHA12Q9UN75 941 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 SOWAHBA6NEL2 793 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 EVI5O60447 810 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 PEX10O60683 326 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 LYPLA2O95372 231 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 SLC25A27O95847 323 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 PDHA1P08559 390 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 CETPP11597 493 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
NOD1-208ENST00000489614 KCNA2P16389 499 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 MCM3P25205 808 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 SKOR1P84550 965 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 TMEM266Q2M3C6 531 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 FOXR2Q6PJQ5 311 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 C6orf89Q6UWU4 347 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 GADL1Q6ZQY3 521 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 TSEN2Q8NCE0 465 aaKnown RBP10.63□□□□□ -0.71
NOD1-208ENST00000489614 GPRASP2Q96D09 838 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 TRIM9Q9C026 710 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 UNC45AQ9H3U1 944 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 TUFT1Q9NNX1 390 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 NOP53Q9NZM5 478 aaKnown RBP10.63□□□□□ -0.71
NOD1-208ENST00000489614 GUCA1BQ9UMX6 200 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 TLL2Q9Y6L7 1015 aa10.63□□□□□ -0.71
NOD1-208ENST00000489614 STBD1O95210 358 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 CELF2O95319 508 aaKnown RBP10.62□□□□□ -0.71
NOD1-208ENST00000489614 SLC10A3P09131 477 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 TUBP50607 506 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 SLC7A5Q01650 507 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 MYBPC3Q14896 1274 aa10.62□□□□□ -0.71
NOD1-208ENST00000489614 CATSPER3Q86XQ3 398 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms