RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 PHOSPHO2Q8TCD6 241 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 LARP4BQ92615 738 aaKnown RBP8.7□□□□□ -1.02
SSR1-210ENST00000489567 TOP1MTQ969P6 601 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 GBF1Q92538 1859 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 TTLL13PA6NNM8 815 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 C9IYK1 514 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 AMHP03971 560 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 EDN1P05305 212 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 IBSPP21815 317 aaPredicted RBP8.7□□□□□ -1.02
SSR1-210ENST00000489567 GUCY2CP25092 1073 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 HOXA11P31270 313 aaPredicted RBP8.7□□□□□ -1.02
SSR1-210ENST00000489567 POU5F1BQ06416 359 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 E2F4Q16254 413 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 AMHR2Q16671 573 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 RRAGBQ5VZM2 374 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 Q7L0L9 218 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 SRGAP1Q7Z6B7 1085 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 GPBP1Q86WP2 473 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 SPATA32Q96LK8 384 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 REEP2Q9BRK0 252 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 FTHL17Q9BXU8 183 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 NKX2-4Q9H2Z4 354 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 RGS18Q9NS28 235 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 USP20Q9Y2K6 914 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 COL4A6Q14031 1691 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 DENND3A2RUS2 1198 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 INO80B-WBP1J3KQ70 363 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 B4GALT5O43286 388 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 TLL1O43897 1013 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 TSPAN1O60635 241 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 CA3P07451 260 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 SFPQP23246 707 aaKnown RBP eCLIP8.69□□□□□ -1.02
SSR1-210ENST00000489567 TXLNAP40222 546 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 PHKA2P46019 1235 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 NPTX2P47972 431 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 GATMP50440 423 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 PEX3P56589 373 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 TFDP1Q14186 410 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 RESP18Q5W5W9 173 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 CDCA2Q69YH5 1023 aaPredicted RBP8.69□□□□□ -1.02
SSR1-210ENST00000489567 CATSPER4Q7RTX7 472 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 SP7Q8TDD2 431 aaPredicted RBP8.69□□□□□ -1.02
SSR1-210ENST00000489567 KIFAP3Q92845 792 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 NFKBIZQ9BYH8 718 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 INO80BQ9C086 356 aaPredicted RBP8.69□□□□□ -1.02
SSR1-210ENST00000489567 TTYH1Q9H313 450 aaPredicted RBP8.69□□□□□ -1.02
SSR1-210ENST00000489567 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 AGPAT5Q9NUQ2 364 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 STK17AQ9UEE5 414 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 CCDC39Q9UFE4 941 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 PIN4Q9Y237 131 aaKnown RBP8.69□□□□□ -1.02
SSR1-210ENST00000489567 PCDHA11Q9Y5I1 949 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 ATP6V1DQ9Y5K8 247 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 CHD9Q3L8U1 2897 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 TCHHQ07283 1943 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 CHD7Q9P2D1 2997 aa8.69□□□□□ -1.02
SSR1-210ENST00000489567 MYMKA6NI61 221 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 ATF7P17544 494 aaPredicted RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 STAT6P42226 847 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 NAMPTP43490 491 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 SARSP49591 514 aaKnown RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 FAM189BP81408 668 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 HTRA4P83105 476 aaPredicted RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 RBM10P98175 930 aaKnown RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 GIT2Q14161 759 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 ODR4Q5SWX8 454 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 CCDC73Q6ZRK6 1079 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 SLC24A5Q71RS6 500 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 TAS1R3Q7RTX0 852 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 CDR2LQ86X02 465 aaPredicted RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 STAMQ92783 540 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 TIFAQ96CG3 184 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 CPB2Q96IY4 423 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 DRC1Q96MC2 740 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 FAM161BQ96MY7 647 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 ZBED2Q9BTP6 218 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 CCDC113Q9H0I3 377 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 RC3H2Q9HBD1 1191 aaKnown RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 KCND2Q9NZV8 630 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 CIZ1Q9ULV3 898 aaPredicted RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 TTC3P53804 2025 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 A0A1B0GVL5 298 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 CCDC169A6NNP5 214 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 MEIS3P2A8K0S8 358 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 POLR2DO15514 142 aaKnown RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 DGKIO75912 1065 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 ARF4P18085 180 aaPredicted RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 LONRF3Q496Y0 759 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 UBXN11Q5T124 520 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 ADALQ6DHV7 355 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 TWF2Q6IBS0 349 aaKnown RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 DYMQ7RTS9 669 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 DEPTORQ8TB45 409 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 DHX58Q96C10 678 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 RAD9AQ99638 391 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 SCAND2PQ9GZW5 306 aaPredicted RBP8.68□□□□□ -1.02
SSR1-210ENST00000489567 FZD8Q9H461 694 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 C1orf112Q9NSG2 853 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 RNF19AQ9NV58 838 aa8.68□□□□□ -1.02
SSR1-210ENST00000489567 MSRAQ9UJ68 235 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms