RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 MTMR6Q9Y217 621 aa14.84□□□□□ -0.03
CCL28-202ENST00000489442 MRPL42Q9Y6G3 142 aaKnown RBP14.84□□□□□ -0.03
CCL28-202ENST00000489442 UNC80Q8N2C7 3258 aa14.84□□□□□ -0.03
CCL28-202ENST00000489442 MYH11P35749 1972 aa14.83□□□□□ -0.03
CCL28-202ENST00000489442 E9PMD0 336 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 H3BNC9 293 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 LPXNO60711 386 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 EYA4O95677 639 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 SSBP05455 408 aaKnown RBP eCLIP14.83□□□□□ -0.04
CCL28-202ENST00000489442 POU3F3P20264 500 aaPredicted RBP14.83□□□□□ -0.04
CCL28-202ENST00000489442 UBA7P41226 1012 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 RAB27AP51159 221 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 CEBPZQ03701 1054 aaKnown RBP14.83□□□□□ -0.04
CCL28-202ENST00000489442 RESTQ13127 1097 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 CALML4Q96GE6 196 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 IFT74Q96LB3 600 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 PLIN2Q99541 437 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 MMTAG2Q9BU76 263 aaKnown RBP14.83□□□□□ -0.04
CCL28-202ENST00000489442 C11orf84Q9BUA3 381 aaPredicted RBP14.83□□□□□ -0.04
CCL28-202ENST00000489442 TMEM117Q9H0C3 514 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 AAASQ9NRG9 546 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 AGPAT5Q9NUQ2 364 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 LMCD1Q9NZU5 365 aa14.83□□□□□ -0.04
CCL28-202ENST00000489442 REV3LO60673 3130 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 KIAA1671Q9BY89 1806 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 PDIA4P13667 645 aaKnown RBP14.82□□□□□ -0.04
CCL28-202ENST00000489442 AXLP30530 894 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 LONP1P36776 959 aaKnown RBP14.82□□□□□ -0.04
CCL28-202ENST00000489442 PPP2R5AQ15172 486 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 LONRF3Q496Y0 759 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 FAM173BQ6P4H8 233 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 CABP7Q86V35 215 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 ZBTB8OSQ8IWT0 167 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 KCTD17Q8N5Z5 321 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 KIFAP3Q92845 792 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 PLVAPQ9BX97 442 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 FAM105AQ9NUU6 356 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 TYW1Q9NV66 732 aaKnown RBP14.82□□□□□ -0.04
CCL28-202ENST00000489442 PCDHB12Q9Y5F1 795 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 CLIC4Q9Y696 253 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 BRWD1Q9NSI6 2320 aa14.82□□□□□ -0.04
CCL28-202ENST00000489442 C5orf67F2Z3F1 127 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 MARCKSP29966 332 aaPredicted RBP14.81□□□□□ -0.04
CCL28-202ENST00000489442 TMEM132AQ24JP5 1023 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
CCL28-202ENST00000489442 NOTUMQ6P988 496 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 IFNLR1Q8IU57 520 aaPredicted RBP14.81□□□□□ -0.04
CCL28-202ENST00000489442 DEPTORQ8TB45 409 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 HELQQ8TDG4 1101 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
CCL28-202ENST00000489442 PGBD4Q96DM1 585 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 TRAIPQ9BWF2 469 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 NFKBIZQ9BYH8 718 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 C2orf40Q9H1Z8 148 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 POLD4Q9HCU8 107 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 PCDHB2Q9Y5E7 798 aa14.81□□□□□ -0.04
CCL28-202ENST00000489442 LIG1P18858 919 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 HOXA11P31270 313 aaPredicted RBP14.8□□□□□ -0.04
CCL28-202ENST00000489442 NAMPTP43490 491 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 MBTD1Q05BQ5 628 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 NAALADL2Q58DX5 795 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 HYIQ5T013 277 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 GLB1LQ6UWU2 654 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 ZNF598Q86UK7 904 aaKnown RBP14.8□□□□□ -0.04
CCL28-202ENST00000489442 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCL28-202ENST00000489442 MRPL38Q96DV4 380 aaKnown RBP14.8□□□□□ -0.04
CCL28-202ENST00000489442 CPB2Q96IY4 423 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 CASD1Q96PB1 797 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 TRIM6Q9C030 488 aaPredicted RBP14.8□□□□□ -0.04
CCL28-202ENST00000489442 MYH15Q9Y2K3 1946 aa14.8□□□□□ -0.04
CCL28-202ENST00000489442 CCDC169A6NNP5 214 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 SLC26A4O43511 780 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 TSPAN1O60635 241 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 ZNF623O75123 536 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 CSPG5O95196 566 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 LINC00271P0C7V0 271 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 ATF7P17544 494 aaPredicted RBP14.79□□□□□ -0.04
CCL28-202ENST00000489442 CLLU1OSQ5K130 101 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 RINT1Q6NUQ1 792 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 KCNK18Q7Z418 384 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 THNSL1Q8IYQ7 743 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 LRRC43Q8N309 656 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 KLHL23Q8NBE8 558 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 CNNM3Q8NE01 707 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 LPPQ93052 612 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 P2RX5Q93086 422 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 CCDC51Q96ER9 411 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 DRC1Q96MC2 740 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 ZNF396Q96N95 335 aaPredicted RBP14.79□□□□□ -0.04
CCL28-202ENST00000489442 PNMA5Q96PV4 448 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 MRPL9Q9BYD2 267 aaKnown RBP14.79□□□□□ -0.04
CCL28-202ENST00000489442 ALG13Q9NP73 1137 aaKnown RBP14.79□□□□□ -0.04
CCL28-202ENST00000489442 PRMT7Q9NVM4 692 aaPredicted RBP14.79□□□□□ -0.04
CCL28-202ENST00000489442 INPP5FQ9Y2H2 1132 aa14.79□□□□□ -0.04
CCL28-202ENST00000489442 CUL9Q8IWT3 2517 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 GRM6O15303 877 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 HIP1RO75146 1068 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 PLA2G4BP0C869 781 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 ITGA4P13612 1032 aa14.78□□□□□ -0.04
CCL28-202ENST00000489442 ARF4P18085 180 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms