RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TAB2Q9NYJ8 693 aa22.92■■□□□ 1.26
SND1-214ENST00000489417 CGNQ9P2M7 1197 aaKnown RBP22.92■■□□□ 1.26
SND1-214ENST00000489417 PTPN22Q9Y2R2 807 aa22.92■■□□□ 1.26
SND1-214ENST00000489417 LRRC10BA6NIK2 292 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 CLIC2O15247 247 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 COPB1P53618 953 aaKnown RBP22.91■■□□□ 1.26
SND1-214ENST00000489417 SNRPFP62306 86 aaKnown RBP22.91■■□□□ 1.26
SND1-214ENST00000489417 TFDP1Q14186 410 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 TAS1R3Q7RTX0 852 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 RHPN2Q8IUC4 686 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 TMEM134Q9H6X4 195 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 A0A1B0GTH6 734 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 GNA14O95837 355 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 TPM3P06753 285 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 MTIF2P46199 727 aaKnown RBP22.91■■□□□ 1.26
SND1-214ENST00000489417 STRN3Q13033 797 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 FILIP1LQ4L180 1135 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 CDCA2Q69YH5 1023 aaPredicted RBP22.91■■□□□ 1.26
SND1-214ENST00000489417 NFRKBQ6P4R8 1299 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 CXCL17Q6UXB2 119 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 ZBTB8OSQ8IWT0 167 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 RNF149Q8NC42 400 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 PPP1R13LQ8WUF5 828 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 C2orf40Q9H1Z8 148 aa22.91■■□□□ 1.26
SND1-214ENST00000489417 PHLPP2Q6ZVD8 1323 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 MBLAC1A4D2B0 266 aaPredicted RBP22.9■■□□□ 1.26
SND1-214ENST00000489417 GJB1P08034 283 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 SRGAP2CP0DJJ0 459 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 EFNA5P52803 228 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 MYBPC2Q14324 1141 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 CCDC40Q4G0X9 1142 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 CCSAPQ6IQ19 270 aaPredicted RBP22.9■■□□□ 1.26
SND1-214ENST00000489417 C12orf56Q8IXR9 622 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 PCSK9Q8NBP7 692 aaKnown RBP22.9■■□□□ 1.26
SND1-214ENST00000489417 MAP7D2Q96T17 732 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 INTS13Q9NVM9 706 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 DMAC2Q9NW81 257 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 HDAC6Q9UBN7 1215 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 AKT3Q9Y243 479 aa22.9■■□□□ 1.26
SND1-214ENST00000489417 SIP14410 1827 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 C17orf102A2RUQ5 167 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 K7ERI5 159 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 SLC16A3O15427 465 aaKnown RBP22.89■■□□□ 1.25
SND1-214ENST00000489417 MYCNP04198 464 aaPredicted RBP22.89■■□□□ 1.25
SND1-214ENST00000489417 ADAM17P78536 824 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 KCNA10Q16322 511 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 RNF180Q86T96 592 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 SLC9A9Q8IVB4 645 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 C7orf31Q8N865 590 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 SH3TC2Q8TF17 1288 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 NLRP4Q96MN2 994 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 TUBGCP2Q9BSJ2 902 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 VPS16Q9H269 839 aa22.89■■□□□ 1.25
SND1-214ENST00000489417 N4BP3O15049 544 aa22.88■■□□□ 1.25
SND1-214ENST00000489417 ASGR1P07306 291 aa22.88■■□□□ 1.25
SND1-214ENST00000489417 TPM2P07951 284 aa22.88■■□□□ 1.25
SND1-214ENST00000489417 GNAT1P11488 350 aa22.88■■□□□ 1.25
SND1-214ENST00000489417 HOXC8P31273 242 aa22.88■■□□□ 1.25
SND1-214ENST00000489417 MARSP56192 900 aaKnown RBP22.88■■□□□ 1.25
SND1-214ENST00000489417 NR1I3Q14994 352 aa22.88■■□□□ 1.25
SND1-214ENST00000489417 DRC7Q8IY82 874 aa22.88■■□□□ 1.25
SND1-214ENST00000489417 BICD1Q96G01 975 aa22.88■■□□□ 1.25
SND1-214ENST00000489417 RTN4Q9NQC3 1192 aaKnown RBP22.88■■□□□ 1.25
SND1-214ENST00000489417 SMIM35A0A1B0GVV1 85 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 TISP43B9A030 160 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 ANKRD63C9JTQ0 380 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 EPB41P11171 864 aaKnown RBP22.87■■□□□ 1.25
SND1-214ENST00000489417 CYP2C9P11712 490 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 PRKCSHP14314 528 aaPredicted RBP22.87■■□□□ 1.25
SND1-214ENST00000489417 CYP2J2P51589 502 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 POU5F1BQ06416 359 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 HIC1Q14526 733 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 NBPF20Q3BBV1 942 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 CEP135Q66GS9 1140 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 LHX8Q68G74 356 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 ARMCX5Q6P1M9 558 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 KIAA0319LQ8IZA0 1049 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 TMEM174Q8WUU8 243 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.87■■□□□ 1.25
SND1-214ENST00000489417 CCDC113Q9H0I3 377 aa22.87■■□□□ 1.25
SND1-214ENST00000489417 HNRNPDLO14979 420 aaKnown RBP22.86■■□□□ 1.25
SND1-214ENST00000489417 PIGRP01833 764 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 VTNP04004 478 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 PHKA2P46019 1235 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 PTENP60484 403 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 MAN2A1Q16706 1144 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 SLC39A4Q6P5W5 647 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 SPC24Q8NBT2 197 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 ZNF668Q96K58 619 aaPredicted RBP22.86■■□□□ 1.25
SND1-214ENST00000489417 MKNK1Q9BUB5 465 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 NOC4LQ9BVI4 516 aaKnown RBP22.86■■□□□ 1.25
SND1-214ENST00000489417 NFKBIZQ9BYH8 718 aa22.86■■□□□ 1.25
SND1-214ENST00000489417 LGALS16A8MUM7 142 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 CABYRO75952 493 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 AKAP3O75969 853 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 PSMC2P35998 433 aaKnown RBP22.85■■□□□ 1.25
SND1-214ENST00000489417 CASP4P49662 377 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 LIG4P49917 911 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 RUFY4Q6ZNE9 571 aa22.85■■□□□ 1.25
SND1-214ENST00000489417 FRMD5Q7Z6J6 570 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms