RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 HOXA11P31270 313 aaPredicted RBP27.8■■■□□ 2.04
HMGN1-217ENST00000489072 HYAL1Q12794 435 aa27.8■■■□□ 2.04
HMGN1-217ENST00000489072 CAPSQ13938 189 aa27.8■■■□□ 2.04
HMGN1-217ENST00000489072 LONRF3Q496Y0 759 aa27.8■■■□□ 2.04
HMGN1-217ENST00000489072 LRRC43Q8N309 656 aa27.8■■■□□ 2.04
HMGN1-217ENST00000489072 ERMNQ8TAM6 284 aa27.8■■■□□ 2.04
HMGN1-217ENST00000489072 LPPQ93052 612 aa27.8■■■□□ 2.04
HMGN1-217ENST00000489072 FAM105AQ9NUU6 356 aa27.8■■■□□ 2.04
HMGN1-217ENST00000489072 DBR1Q9UK59 544 aaKnown RBP27.8■■■□□ 2.04
HMGN1-217ENST00000489072 MEIS3P2A8K0S8 358 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 FGF18O76093 207 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 LAG3P18627 525 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 GLRA2P23416 452 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 PTENP60484 403 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 ECM1Q16610 540 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 PABPC5Q96DU9 382 aaKnown RBP27.79■■■□□ 2.04
HMGN1-217ENST00000489072 NACC1Q96RE7 527 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 BACH2Q9BYV9 841 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 POLR3FQ9H1D9 316 aaPredicted RBP27.79■■■□□ 2.04
HMGN1-217ENST00000489072 SMC3Q9UQE7 1217 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 PCDHGC5Q9Y5F6 944 aa27.79■■■□□ 2.04
HMGN1-217ENST00000489072 ZNF623O75123 536 aa27.78■■■□□ 2.04
HMGN1-217ENST00000489072 GTF2F1P35269 517 aaKnown RBP eCLIP27.78■■■□□ 2.04
HMGN1-217ENST00000489072 PBX3P40426 434 aa27.78■■■□□ 2.04
HMGN1-217ENST00000489072 LEXMQ3ZCV2 418 aa27.78■■■□□ 2.04
HMGN1-217ENST00000489072 IFNLR1Q8IU57 520 aaPredicted RBP27.78■■■□□ 2.04
HMGN1-217ENST00000489072 THNSL1Q8IYQ7 743 aa27.78■■■□□ 2.04
HMGN1-217ENST00000489072 GPRC5CQ9NQ84 441 aa27.78■■■□□ 2.04
HMGN1-217ENST00000489072 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.78■■■□□ 2.04
HMGN1-217ENST00000489072 SKIP12755 728 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 RAB27AP51159 221 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 POU5F1BQ06416 359 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 TFDP1Q14186 410 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 IL17AQ16552 155 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 UBXN11Q5T124 520 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 KCNT2Q6UVM3 1135 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 ADGRD2Q7Z7M1 963 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 IGSF22Q8N9C0 903 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.77■■■□□ 2.04
HMGN1-217ENST00000489072 LRWD1Q9UFC0 647 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 PCDHB2Q9Y5E7 798 aa27.77■■■□□ 2.04
HMGN1-217ENST00000489072 H3BQ06 376 aaPredicted RBP27.76■■■□□ 2.03
HMGN1-217ENST00000489072 H3BQV1 296 aa27.76■■■□□ 2.03
HMGN1-217ENST00000489072 TNFRSF10AO00220 468 aa27.76■■■□□ 2.03
HMGN1-217ENST00000489072 CCT6AP40227 531 aaKnown RBP27.76■■■□□ 2.03
HMGN1-217ENST00000489072 UBE3AQ05086 875 aa27.76■■■□□ 2.03
HMGN1-217ENST00000489072 CSPP1Q1MSJ5 1256 aa27.76■■■□□ 2.03
HMGN1-217ENST00000489072 CTC1Q2NKJ3 1217 aa27.76■■■□□ 2.03
HMGN1-217ENST00000489072 MAEAQ7L5Y9 396 aa27.76■■■□□ 2.03
HMGN1-217ENST00000489072 CLDND1Q9NY35 253 aa27.76■■■□□ 2.03
HMGN1-217ENST00000489072 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.76■■■□□ 2.03
HMGN1-217ENST00000489072 TSPAN1O60635 241 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 LTBRP36941 435 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 MBTD1Q05BQ5 628 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 PDIA5Q14554 519 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 AMHR2Q16671 573 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 HAUS3Q68CZ6 603 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 EP400NLQ6ZTU2 488 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 ZNF558Q96NG5 402 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 IGFLR1Q9H665 355 aa27.75■■■□□ 2.03
HMGN1-217ENST00000489072 INO80B-WBP1J3KQ70 363 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 ERLIN2O94905 339 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 MUTP22033 750 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 ERVFC1P60507 584 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 RILPL1Q5EBL4 403 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 PADI6Q6TGC4 694 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 AGMOQ6ZNB7 445 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 MRPL10Q7Z7H8 261 aaKnown RBP27.74■■■□□ 2.03
HMGN1-217ENST00000489072 MCPH1Q8NEM0 835 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 MRPL9Q9BYD2 267 aaKnown RBP27.74■■■□□ 2.03
HMGN1-217ENST00000489072 TLR9Q9NR96 1032 aa27.74■■■□□ 2.03
HMGN1-217ENST00000489072 ARHGEF35A5YM69 484 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 PP2D1A8MPX8 630 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 LAD1O00515 517 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 LINC01565O15544 149 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 NCK2O43639 380 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 OFD1O75665 1012 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 PRPHP41219 470 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 PLCB3Q01970 1234 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 DLX2Q07687 328 aaPredicted RBP27.73■■■□□ 2.03
HMGN1-217ENST00000489072 CUL4AQ13619 759 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 PCBP1Q15365 356 aaKnown RBP eCLIP27.73■■■□□ 2.03
HMGN1-217ENST00000489072 LARP1BQ659C4 914 aaKnown RBP27.73■■■□□ 2.03
HMGN1-217ENST00000489072 GLB1LQ6UWU2 654 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 CPB2Q96IY4 423 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 NFKBIZQ9BYH8 718 aa27.73■■■□□ 2.03
HMGN1-217ENST00000489072 FSCN2O14926 492 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 CYP11B2P19099 503 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 NOMO2Q5JPE7 1267 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 SLC39A11Q8N1S5 342 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 SNX29Q8TEQ0 813 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 MRPS27Q92552 414 aaKnown RBP27.72■■■□□ 2.03
HMGN1-217ENST00000489072 PGBD4Q96DM1 585 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 EIF2AQ9BY44 585 aaKnown RBP27.72■■■□□ 2.03
HMGN1-217ENST00000489072 TBC1D13Q9NVG8 400 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 SPG21Q9NZD8 308 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 KIAA1024Q9UPX6 916 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 LZTS1Q9Y250 596 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 INPP5FQ9Y2H2 1132 aa27.72■■■□□ 2.03
HMGN1-217ENST00000489072 CDC25AP30304 524 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms