RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ST13P5Q8NFI4 369 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 ASB11Q8WXH4 323 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 BRF1Q92994 677 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 UBE2FQ969M7 185 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 FAM122AQ96E09 287 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 MISP3Q96FF7 219 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 NACAP1Q9BZK3 213 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 KLHL25Q9H0H3 589 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 PUS7LQ9H0K6 701 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 DDX4Q9NQI0 724 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 CHST7Q9NS84 486 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 ATP8A2Q9NTI2 1148 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 MCM9Q9NXL9 1143 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 PI4KBQ9UBF8 816 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 SF3B6Q9Y3B4 125 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 MSRB2Q9Y3D2 182 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 MYPNQ86TC9 1320 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 ATRNL1Q5VV63 1379 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 ALPK3Q96L96 1907 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 COL2A1P02458 1487 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 MEIS1O00470 390 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 CBFA2T2O43439 604 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 SIGLEC6O43699 453 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 TPP2P29144 1249 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 MCMDC2Q4G0Z9 681 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 FAM109BQ6ICB4 259 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 MRM1Q6IN84 353 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 MIGA2Q7L4E1 593 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 TMC3Q7Z5M5 1100 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 THAP5Q7Z6K1 395 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 FOXP4Q8IVH2 680 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZFPM1Q8IX07 1006 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 ADCY4Q8NFM4 1077 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 SDR42E1Q8WUS8 393 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 RUFY2Q8WXA3 655 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 OSBP2Q969R2 916 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 STRBPQ96SI9 672 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.49□□□□□ -0.892e-6■■■■■ 28.1
TRAPPC12-221ENST00000489032 SAP30BPQ9UHR5 308 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZMYND8Q9ULU4 1186 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 PLAGL2Q9UPG8 496 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 DIS3Q9Y2L1 958 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 ST14Q9Y5Y6 855 aa9.49□□□□□ -0.89
TRAPPC12-221ENST00000489032 DDTLA6NHG4 134 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 M0R2C6 588 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 PRAMEF1O95521 474 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 CHGBP05060 677 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 CETPP11597 493 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 GSPT1P15170 499 aaKnown RBP9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 MAGEA10P43363 369 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 TDO2P48775 406 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 GIMAP6Q6P9H5 292 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 POMZP3Q6PJE2 187 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 CASC1Q6TDU7 716 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 NECAB2Q7Z6G3 386 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 STK11IPQ8N1F8 1099 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 LRRN4CLQ8ND94 238 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 SYTL5Q8TDW5 730 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 PAWRQ96IZ0 340 aaKnown RBP9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 GUCD1Q96NT3 240 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 WRNIP1Q96S55 665 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 NOL6Q9H6R4 1146 aaKnown RBP9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 DCP1AQ9NPI6 582 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 HERC5Q9UII4 1024 aaKnown RBP9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 VAV3Q9UKW4 847 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 PALD1Q9ULE6 856 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 FHOD1Q9Y613 1164 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 U3KQE9 123 aa9.48□□□□□ -0.89
TRAPPC12-221ENST00000489032 PRKAB2O43741 272 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 CTGFP29279 349 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZNF445P59923 1031 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 PRKCQQ04759 706 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 PPP2R5DQ14738 602 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 BMP2KLQ5H9B9 411 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 CWC27Q6UX04 472 aaKnown RBP9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 C17orf99Q6UX52 265 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 NOP9Q86U38 636 aaKnown RBP9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 FIBCD1Q8N539 461 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZNF655Q8N720 491 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 DAGLBQ8NCG7 672 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 BVESQ8NE79 360 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 FAM227BQ96M60 508 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 NAPBQ9H115 298 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 DUSP15Q9H1R2 295 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 ARPP21Q9UBL0 812 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 AKT3Q9Y243 479 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 EYSQ5T1H1 3165 aa9.47□□□□□ -0.89
TRAPPC12-221ENST00000489032 A0A0D9SFI3 127 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 BTBD19C9JJ37 291 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 SHOXO15266 292 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 SLC3A2P08195 630 aaKnown RBP9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 SSTR4P31391 388 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 VGLL4Q14135 290 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 TSPYL5Q86VY4 417 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 IFNL3Q8IZI9 196 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 LRRC47Q8N1G4 583 aaKnown RBP9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 DEFB118Q96PH6 123 aa9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 SEC62Q99442 399 aaKnown RBP9.46□□□□□ -0.9
TRAPPC12-221ENST00000489032 ZNF287Q9HBT7 754 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms