RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NOC2LQ9Y3T9 749 aaKnown RBP5.22□□□□□ -1.57
RFC4-213ENST00000489028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.21□□□□□ -1.58
RFC4-213ENST00000489028 A0A1W2PRX2 142 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 MUSKO15146 869 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 MATN3O15232 486 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 RAB11FIP3O75154 756 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 LY86O95711 162 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 LPLP06858 475 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 VSIG10L2P0DP72 767 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 PPARAQ07869 468 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 PUM1Q14671 1186 aaKnown RBP eCLIP5.21□□□□□ -1.58
RFC4-213ENST00000489028 GRM7Q14831 915 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 CT83Q5H943 113 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 SH3RF3Q8TEJ3 882 aaPredicted RBP5.21□□□□□ -1.58
RFC4-213ENST00000489028 GAB3Q8WWW8 586 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 ING3Q9NXR8 418 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 EVLQ9UI08 416 aaPredicted RBP5.21□□□□□ -1.58
RFC4-213ENST00000489028 SYNPO2Q9UMS6 1093 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 NUMBLQ9Y6R0 609 aa5.21□□□□□ -1.58
RFC4-213ENST00000489028 UBE2QL1A1L167 161 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 PLSCR1O15162 318 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 TNFRSF1AP19438 455 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 KIR2DL3P43628 341 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 SESN3P58005 492 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 ZXDCQ2QGD7 858 aaPredicted RBP5.2□□□□□ -1.58
RFC4-213ENST00000489028 GAGE13Q4V321 117 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 CT47A1Q5JQC4 288 aaPredicted RBP5.2□□□□□ -1.58
RFC4-213ENST00000489028 SPTY2D1Q68D10 685 aaPredicted RBP5.2□□□□□ -1.58
RFC4-213ENST00000489028 MSL3Q8N5Y2 521 aaKnown RBP5.2□□□□□ -1.58
RFC4-213ENST00000489028 EDAQ92838 391 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 KRTAP4-2Q9BYR5 136 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 KCTD10Q9H3F6 313 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 C14orf93Q9H972 538 aaKnown RBP5.2□□□□□ -1.58
RFC4-213ENST00000489028 IL23AQ9NPF7 189 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 PRSS50Q9UI38 385 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 EDARQ9UNE0 448 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 MYRFQ9Y2G1 1151 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 SH3BP1Q9Y3L3 701 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 TESMINQ9Y4I5 508 aa5.2□□□□□ -1.58
RFC4-213ENST00000489028 CADPSQ9ULU8 1353 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 MAFGO15525 162 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 DAPK3O43293 454 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 ULK1O75385 1050 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 CLSTN1O94985 981 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 FSBPO95073 299 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 CNGA1P29973 690 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 TMPRSS15P98073 1019 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 MGAT5Q09328 741 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 HS1BP3Q53T59 392 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 ZNF662Q6ZS27 426 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 UNC5BQ8IZJ1 945 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 D2HGDHQ8N465 521 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 COG1Q8WTW3 980 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 EAF2Q96CJ1 260 aaPredicted RBP5.19□□□□□ -1.58
RFC4-213ENST00000489028 UIMC1Q96RL1 719 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 WNT8AQ9H1J5 351 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 TLR9Q9NR96 1032 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 PRKAB1Q9Y478 270 aa5.19□□□□□ -1.58
RFC4-213ENST00000489028 A0A1W2PR48 441 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 GOLGA8BA8MQT2 603 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 GPR39O43194 453 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 MTSS1O43312 755 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 BRINP1O60477 761 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 TMEM127O75204 238 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 STC2O76061 302 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 ALDH1A2O94788 518 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 PRKD3O94806 890 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 CFBP00751 764 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 JUNP05412 331 aaKnown RBP5.18□□□□□ -1.58
RFC4-213ENST00000489028 GPR15P49685 360 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 LGALS4P56470 323 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 PRKD1Q15139 912 aaPredicted RBP5.18□□□□□ -1.58
RFC4-213ENST00000489028 FSCN1Q16658 493 aaKnown RBP5.18□□□□□ -1.58
RFC4-213ENST00000489028 MAN2A1Q16706 1144 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 KRT40Q6A162 431 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 DBX2Q6ZNG2 339 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 TGFBRAP1Q8WUH2 860 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 CDK5RAP1Q96SZ6 601 aaKnown RBP5.18□□□□□ -1.58
RFC4-213ENST00000489028 ENKD1Q9H0I2 346 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 CDY2AQ9Y6F7 541 aa5.18□□□□□ -1.58
RFC4-213ENST00000489028 SBNO2Q9Y2G9 1366 aa5.17□□□□□ -1.58
RFC4-213ENST00000489028 FAM214AQ32MH5 1076 aa5.17□□□□□ -1.58
RFC4-213ENST00000489028 FAM111BQ6SJ93 734 aa5.17□□□□□ -1.58
RFC4-213ENST00000489028 LMBR1Q8WVP7 490 aa5.17□□□□□ -1.58
RFC4-213ENST00000489028 EXTL1Q92935 676 aa5.17□□□□□ -1.58
RFC4-213ENST00000489028 TCF25Q9BQ70 676 aa5.17□□□□□ -1.58
RFC4-213ENST00000489028 NCDNQ9UBB6 729 aa5.17□□□□□ -1.58
RFC4-213ENST00000489028 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.17□□□□□ -1.58
RFC4-213ENST00000489028 CAPN14A8MX76 684 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 ENPP1P22413 925 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 SCAND1P57086 179 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 UBE3CQ15386 1083 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 UGT8Q16880 541 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.16□□□□□ -1.58
RFC4-213ENST00000489028 CCDC178Q5BJE1 867 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 IQSEC1Q6DN90 963 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 TAS1R1Q7RTX1 841 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 CMTM4Q8IZR5 234 aa5.16□□□□□ -1.58
RFC4-213ENST00000489028 OR14C36Q8NHC7 312 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms