RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 CCDC169A6NNP5 214 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 INO80B-WBP1J3KQ70 363 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 SOX1O00570 391 aaPredicted RBP16.75■□□□□ 0.27
FDPS-213ENST00000489003 PFKFB1P16118 471 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
FDPS-213ENST00000489003 ZSCAN20P17040 1043 aaPredicted RBP16.75■□□□□ 0.27
FDPS-213ENST00000489003 NPTX2P47972 431 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 FAM189BP81408 668 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 AMHR2Q16671 573 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 CDCA2Q69YH5 1023 aaPredicted RBP16.75■□□□□ 0.27
FDPS-213ENST00000489003 DYMQ7RTS9 669 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 HERC6Q8IVU3 1022 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 ZBTB8OSQ8IWT0 167 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 CRIPAKQ8N1N5 446 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 DEPTORQ8TB45 409 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 FZD8Q9H461 694 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 C17orf75Q9HAS0 396 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 KBTBD4Q9NVX7 518 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 ODF2LQ9ULJ1 636 aa16.75■□□□□ 0.27
FDPS-213ENST00000489003 ADGRA3Q8IWK6 1321 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 GBF1Q92538 1859 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 DENND3A2RUS2 1198 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 C9IYK1 514 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 PLS3P13797 630 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 HOXA11P31270 313 aaPredicted RBP16.74■□□□□ 0.27
FDPS-213ENST00000489003 RABGGTBP53611 331 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 PCBP1Q15365 356 aaKnown RBP eCLIP16.74■□□□□ 0.274e-7■□□□□ 9.7
FDPS-213ENST00000489003 LONRF3Q496Y0 759 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 FAM117BQ6P1L5 589 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 FSIP1Q8NA03 581 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 DDX12PQ92771 950 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 DNAJC19Q96DA6 116 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 KIFC3Q9BVG8 833 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 C2orf40Q9H1Z8 148 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 CUEDC2Q9H467 287 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 SERTAD1Q9UHV2 236 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 KCNG1Q9UIX4 513 aa16.74■□□□□ 0.27
FDPS-213ENST00000489003 RANBP2P49792 3224 aaKnown RBP16.74■□□□□ 0.27
FDPS-213ENST00000489003 FAM13AO94988 1023 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 UPP2O95045 317 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 GJB5O95377 273 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 MYOGP15173 224 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 PBX2P40425 430 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 NDUFA8P51970 172 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 ZNF131P52739 623 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 SMAD3P84022 425 aaKnown RBP16.73■□□□□ 0.27
FDPS-213ENST00000489003 DMP1Q13316 513 aaPredicted RBP16.73■□□□□ 0.27
FDPS-213ENST00000489003 SLC24A5Q71RS6 500 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 MYCT1Q8N699 235 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 SPIRE2Q8WWL2 714 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
FDPS-213ENST00000489003 PYM1Q9BRP8 204 aaKnown RBP16.73■□□□□ 0.27
FDPS-213ENST00000489003 PBX4Q9BYU1 374 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 CCDC113Q9H0I3 377 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 TNMDQ9H2S6 317 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 GOLPH3LQ9H4A5 285 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 TMEM134Q9H6X4 195 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 KMT5AQ9NQR1 393 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 C1orf112Q9NSG2 853 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
FDPS-213ENST00000489003 PRMT7Q9NVM4 692 aaPredicted RBP16.73■□□□□ 0.27
FDPS-213ENST00000489003 TTLL13PA6NNM8 815 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 K7ERI5 159 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 ACKR2O00590 384 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 SLC16A4O15374 487 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 B4GALT5O43286 388 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 TSPAN1O60635 241 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 SLFN14P0C7P3 912 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 ARF4P18085 180 aaPredicted RBP16.72■□□□□ 0.27
FDPS-213ENST00000489003 AXLP30530 894 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 SYKP43405 635 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 EFNA5P52803 228 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 AMPD3Q01432 767 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 FAM187BQ17R55 369 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 LRCH3Q96II8 777 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 CPB2Q96IY4 423 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 LRRC27Q9C0I9 530 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 ZHX3Q9H4I2 956 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 PARVGQ9HBI0 331 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 DACT1Q9NYF0 836 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 LARSQ9P2J5 1176 aaKnown RBP16.72■□□□□ 0.27
FDPS-213ENST00000489003 ARHGAP28Q9P2N2 729 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 PIN4Q9Y237 131 aaKnown RBP16.72■□□□□ 0.27
FDPS-213ENST00000489003 USP20Q9Y2K6 914 aa16.72■□□□□ 0.27
FDPS-213ENST00000489003 A0A0U1RQF3 1178 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 A0A1B0GUA9 196 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 ACTN4O43707 911 aaKnown RBP16.71■□□□□ 0.27
FDPS-213ENST00000489003 GADD45BO75293 160 aaPredicted RBP16.71■□□□□ 0.27
FDPS-213ENST00000489003 ERLIN2O94905 339 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 EDN1P05305 212 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 PRKCBP05771 671 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 LIG1P18858 919 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 SARSP49591 514 aaKnown RBP16.71■□□□□ 0.27
FDPS-213ENST00000489003 SMTNP53814 917 aa16.71■□□□□ 0.27
FDPS-213ENST00000489003 NCBP1Q09161 790 aaKnown RBP16.71■□□□□ 0.27
FDPS-213ENST00000489003 MAPK6Q16659 721 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms