RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 KSR1Q8IVT5 923 aa17.63■□□□□ 0.41
CLDN11-208ENST00000488989 DEPTORQ8TB45 409 aa17.63■□□□□ 0.41
CLDN11-208ENST00000488989 KIFC3Q9BVG8 833 aa17.63■□□□□ 0.41
CLDN11-208ENST00000488989 C2orf40Q9H1Z8 148 aa17.63■□□□□ 0.41
CLDN11-208ENST00000488989 TMEM206Q9H813 350 aa17.63■□□□□ 0.41
CLDN11-208ENST00000488989 CTNND2Q9UQB3 1225 aa17.63■□□□□ 0.41
CLDN11-208ENST00000488989 AKT3Q9Y243 479 aa17.63■□□□□ 0.41
CLDN11-208ENST00000488989 ZMYM2Q9UBW7 1377 aa17.63■□□□□ 0.41
CLDN11-208ENST00000488989 BICDL2A1A5D9 508 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 DENND3A2RUS2 1198 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 LRRIQ4A6NIV6 560 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 SMTNL1A8MU46 457 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 PDXKO00764 312 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 GPC3P51654 580 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 EFNA5P52803 228 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 PMS1P54277 932 aaKnown RBP17.62■□□□□ 0.41
CLDN11-208ENST00000488989 MYL5Q02045 173 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 LRRC63Q05C16 580 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 KCNA1Q09470 495 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 FAM47CQ5HY64 1035 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 RNF149Q8NC42 400 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 VTI1AQ96AJ9 217 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 ACCSQ96QU6 501 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 CCDC113Q9H0I3 377 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 ADAMTS10Q9H324 1103 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 TBX20Q9UMR3 447 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 TRAF3IP3Q9Y228 551 aa17.62■□□□□ 0.41
CLDN11-208ENST00000488989 TGFB1I1O43294 461 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 GPR32O75388 356 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 TFRCP02786 760 aaKnown RBP17.61■□□□□ 0.41
CLDN11-208ENST00000488989 VTNP04004 478 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 COL6A1P12109 1028 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 SNRPFP62306 86 aaKnown RBP17.61■□□□□ 0.41
CLDN11-208ENST00000488989 GSE1Q14687 1217 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 NFIL3Q16649 462 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 SPATA1Q5VX52 437 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 ANKRD40Q6AI12 368 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 ZBTB8OSQ8IWT0 167 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 NELFCDQ8IXH7 590 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 ZC3H3Q8IXZ2 948 aaKnown RBP17.61■□□□□ 0.41
CLDN11-208ENST00000488989 AOPEPQ8N6M6 819 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 TMEM174Q8WUU8 243 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 DNAJB3Q8WWF6 145 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 DUSP9Q99956 384 aaKnown RBP17.61■□□□□ 0.41
CLDN11-208ENST00000488989 IFT122Q9HBG6 1241 aa17.61■□□□□ 0.41
CLDN11-208ENST00000488989 TYW1Q9NV66 732 aaKnown RBP17.61■□□□□ 0.41
CLDN11-208ENST00000488989 BRCA2P51587 3418 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 A0A087WZ62 844 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 TRIM49BA6NDI0 452 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 PIGRP01833 764 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 SRGAP2CP0DJJ0 459 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 PHKA2P46019 1235 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 STX17P56962 302 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 NLRP11P59045 1033 aaKnown RBP17.6■□□□□ 0.41
CLDN11-208ENST00000488989 PTK7Q13308 1070 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 PTGISQ16647 500 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 FAM187BQ17R55 369 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 EDRF1Q3B7T1 1238 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 SRGAP1Q7Z6B7 1085 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 LUZP1Q86V48 1076 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 RNF214Q8ND24 703 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 NLRP4Q96MN2 994 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 FDXACB1Q9BRP7 624 aaPredicted RBP17.6■□□□□ 0.41
CLDN11-208ENST00000488989 FAM49AQ9H0Q0 323 aaPredicted RBP17.6■□□□□ 0.41
CLDN11-208ENST00000488989 GBP3Q9H0R5 595 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 FZD8Q9H461 694 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 CGNQ9P2M7 1197 aaKnown RBP17.6■□□□□ 0.41
CLDN11-208ENST00000488989 EXOC7Q9UPT5 735 aa17.6■□□□□ 0.41
CLDN11-208ENST00000488989 BECN2A8MW95 431 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 K7ERI5 159 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 MBTD1Q05BQ5 628 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 SNX17Q15036 470 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 TRIM71Q2Q1W2 868 aaKnown RBP17.59■□□□□ 0.41
CLDN11-208ENST00000488989 UVSSAQ2YD98 709 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 C1orf53Q5VUE5 145 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 RSPH3Q86UC2 560 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 C12orf56Q8IXR9 622 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 GOLGA5Q8TBA6 731 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 WNT8BQ93098 351 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 TSG101Q99816 390 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 HSD3B7Q9H2F3 369 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 NFE2L3Q9Y4A8 694 aa17.59■□□□□ 0.41
CLDN11-208ENST00000488989 CALUO43852 315 aaPredicted RBP17.58■□□□□ 0.4
CLDN11-208ENST00000488989 B4GALT4O60513 344 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 CAND2O75155 1236 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 RBL2Q08999 1139 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 MGAT3Q09327 533 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 MYBPC2Q14324 1141 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 SLC9A9Q8IVB4 645 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 FAM126BQ8IXS8 530 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 NOC3LQ8WTT2 800 aaKnown RBP17.58■□□□□ 0.4
CLDN11-208ENST00000488989 DHX38Q92620 1227 aaKnown RBP17.58■□□□□ 0.4
CLDN11-208ENST00000488989 TMEM106CQ9BVX2 250 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 TRMT13Q9NUP7 481 aaKnown RBP17.58■□□□□ 0.4
CLDN11-208ENST00000488989 PRMT7Q9NVM4 692 aaPredicted RBP17.58■□□□□ 0.4
CLDN11-208ENST00000488989 DNAH12Q6ZR08 3092 aa17.58■□□□□ 0.4
CLDN11-208ENST00000488989 MROH7Q68CQ1 1323 aa17.57■□□□□ 0.4
CLDN11-208ENST00000488989 GOLGA6L3A6NEY3 463 aa17.57■□□□□ 0.4
CLDN11-208ENST00000488989 ACKR2O00590 384 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms