RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 SLC39A11Q8N1S5 342 aa14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 HELQQ8TDG4 1101 aa14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 PRPF31Q8WWY3 499 aaKnown RBP14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 AGPAT5Q9NUQ2 364 aa14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 FAM105AQ9NUU6 356 aa14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 RGL1Q9NZL6 768 aa14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 HCN4Q9Y3Q4 1203 aa14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 PCDHGC5Q9Y5F6 944 aa14.6□□□□□ -0.07
ATPAF2-207ENST00000488753 FAM205CA6NFA0 338 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 BTBD18B2RXH4 712 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 PER2O15055 1255 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 NEMFO60524 1076 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 DTNBO60941 627 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 SLITRK3O94933 977 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 LAMTOR4Q0VGL1 99 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 CTTNQ14247 550 aaKnown RBP14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 BMS1Q14692 1282 aaKnown RBP14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 EMC2Q15006 297 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 CALCRLQ16602 461 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 TMEM143Q96AN5 459 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 PGBD4Q96DM1 585 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 DYDC2Q96IM9 177 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 HSD17B14Q9BPX1 270 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 ENTPD7Q9NQZ7 604 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 BARX2Q9UMQ3 279 aaPredicted RBP14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 LIMCH1Q9UPQ0 1083 aa14.59□□□□□ -0.07
ATPAF2-207ENST00000488753 JAK2O60674 1132 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 PBX3P40426 434 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 BCAR1P56945 870 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 CYP4A11Q02928 519 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 POU5F1BQ06416 359 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 MXD4Q14582 209 aaPredicted RBP14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 XKR9Q5GH70 373 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 PLPP4Q5VZY2 271 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 TMC7Q7Z402 723 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 FERMT3Q86UX7 667 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 TPH2Q8IWU9 490 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 MRPL43Q8N983 215 aaKnown RBP14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 VN1R2Q8NFZ6 395 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 MTMR9Q96QG7 549 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 MTRQ99707 1265 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 EIF2AK1Q9BQI3 630 aaKnown RBP14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 TTC12Q9H892 705 aaPredicted RBP14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 ANKEF1Q9NU02 776 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 STK39Q9UEW8 545 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 USP15Q9Y4E8 981 aaPredicted RBP14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 PCDHB2Q9Y5E7 798 aa14.58□□□□□ -0.08
ATPAF2-207ENST00000488753 PLXNA4Q9HCM2 1894 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 FAM86C2PA6NEL3 165 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 OFD1O75665 1012 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 DGAT1O75907 488 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 SRGAP2CP0DJJ0 459 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 XRCC6P12956 609 aaKnown RBP eCLIP14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 HOXB8P17481 243 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 SMC1AQ14683 1233 aaKnown RBP14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 HERC4Q5GLZ8 1057 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 NOMO2Q5JPE7 1267 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 MRPL10Q7Z7H8 261 aaKnown RBP14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 RNF149Q8NC42 400 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 SUSD6Q92537 303 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 TMEM169Q96HH4 297 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 LLPHQ9BRT6 129 aaKnown RBP14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 PHF7Q9BWX1 381 aaPredicted RBP14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 TBC1D13Q9NVG8 400 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 RAPGEFL1Q9UHV5 662 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 CNTNAP2Q9UHC6 1331 aa14.57□□□□□ -0.08
ATPAF2-207ENST00000488753 C5orf42Q9H799 3197 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 HIDE1A8MVS5 230 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 LOC730098B7Z3J9 87 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 ZC3H11AO75152 810 aaKnown RBP eCLIP14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 SEC24BO95487 1268 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 AXLP30530 894 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 HOXA11P31270 313 aaPredicted RBP14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 PLA2G5P39877 138 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 ST3GAL1Q11201 340 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 ORC2Q13416 577 aaPredicted RBP14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 GIT2Q14161 759 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 TFDP1Q14186 410 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 CBX2Q14781 532 aaPredicted RBP14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 ANKRD54Q6NXT1 300 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 IFNLR1Q8IU57 520 aaPredicted RBP14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 RNF135Q8IUD6 432 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 CNNM3Q8NE01 707 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 LPPQ93052 612 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 CCDC51Q96ER9 411 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 NFKBIZQ9BYH8 718 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 NRDE2Q9H7Z3 1164 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 MINDY3Q9H8M7 445 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 UBN1Q9NPG3 1134 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 XPNPEP1Q9NQW7 623 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 KANSL3Q9P2N6 904 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 IRAK3Q9Y616 596 aa14.56□□□□□ -0.08
ATPAF2-207ENST00000488753 C2orf71A6NGG8 1288 aa14.55□□□□□ -0.08
ATPAF2-207ENST00000488753 ZBTB39O15060 712 aa14.55□□□□□ -0.08
ATPAF2-207ENST00000488753 ERLIN2O94905 339 aa14.55□□□□□ -0.08
ATPAF2-207ENST00000488753 NCLP19338 710 aaKnown RBP14.55□□□□□ -0.08
ATPAF2-207ENST00000488753 TECP42680 631 aa14.55□□□□□ -0.08
ATPAF2-207ENST00000488753 TXKP42681 527 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms