RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 KIAA1958Q8N8K9 716 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 WDR48Q8TAF3 677 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 DLG3Q92796 817 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 GBP4Q96PP9 640 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 ELF4Q99607 663 aaPredicted RBP4.5□□□□□ -1.69
CD46-215ENST00000488596 B3GALT1Q9Y5Z6 326 aa4.5□□□□□ -1.69
CD46-215ENST00000488596 TGM5O43548 720 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 ZEB2O60315 1214 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 HIP1RO75146 1068 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 CPEP16870 476 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 PTX3P26022 381 aaPredicted RBP4.49□□□□□ -1.69
CD46-215ENST00000488596 LSSP48449 732 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 SLC25A3Q00325 362 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 ZNF174Q15697 407 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 ATP13A4Q4VNC1 1196 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 DNAJC10Q8IXB1 793 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 ULK2Q8IYT8 1036 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 COG1Q8WTW3 980 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 ZG16BQ96DA0 208 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 VTA1Q9NP79 307 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 EMC7Q9NPA0 242 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 KCNH7Q9NS40 1196 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 TOMM22Q9NS69 142 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 PARPBPQ9NWS1 579 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 MCM8Q9UJA3 840 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 REXO2Q9Y3B8 237 aaKnown RBP4.49□□□□□ -1.69
CD46-215ENST00000488596 CTDP1Q9Y5B0 961 aaPredicted RBP4.49□□□□□ -1.69
CD46-215ENST00000488596 PHLDB1Q86UU1 1377 aa4.49□□□□□ -1.69
CD46-215ENST00000488596 WASHC2CQ9Y4E1 1318 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 LCHNA4D1U4 455 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 GOLGA6L22H0YM25 854 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 GPR39O43194 453 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 BRINP1O60477 761 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 SCNN1GP51170 649 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 GUCY2FP51841 1108 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 ATP2C1P98194 919 aaPredicted RBP4.48□□□□□ -1.69
CD46-215ENST00000488596 CRHR2Q13324 411 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 Q6ZRM9 215 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 HIPK4Q8NE63 616 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 STAG1Q8WVM7 1258 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 RABGGTAQ92696 567 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 ERCC4Q92889 916 aaPredicted RBP4.48□□□□□ -1.69
CD46-215ENST00000488596 MPHOSPH9Q99550 1183 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 CCDC8Q9H0W5 538 aaPredicted RBP4.48□□□□□ -1.69
CD46-215ENST00000488596 PCIF1Q9H4Z3 704 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 HOMER2Q9NSB8 354 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 MAGEL2Q9UJ55 1249 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 ASB1Q9Y576 335 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 SPO11Q9Y5K1 396 aa4.48□□□□□ -1.69
CD46-215ENST00000488596 FOXP2O15409 715 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 CYP27B1O15528 508 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 KATNA1O75449 491 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 ADCY7P51828 1080 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 ATXN1P54253 815 aaKnown RBP4.47□□□□□ -1.69
CD46-215ENST00000488596 COL10A1Q03692 680 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 CATSPEREQ5SY80 951 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 BROXQ5VW32 411 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 RNF219Q5W0B1 726 aaPredicted RBP4.47□□□□□ -1.69
CD46-215ENST00000488596 CC2D1AQ6P1N0 951 aaPredicted RBP4.47□□□□□ -1.69
CD46-215ENST00000488596 HDGFL2Q7Z4V5 671 aaPredicted RBP4.47□□□□□ -1.69
CD46-215ENST00000488596 C11orf74Q86VG3 221 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 EFHBQ8N7U6 833 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 NAF1Q96HR8 494 aaKnown RBP4.47□□□□□ -1.69
CD46-215ENST00000488596 TTPALQ9BTX7 342 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 ACSS2Q9NR19 701 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 DDX56Q9NY93 547 aaKnown RBP4.47□□□□□ -1.69
CD46-215ENST00000488596 GPRC5BQ9NZH0 403 aa4.47□□□□□ -1.69
CD46-215ENST00000488596 A0A1W2PRX2 142 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 FOXN1O15353 648 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 RAMP2O60895 175 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 PPFIA2O75334 1257 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 RPS6KA4O75676 772 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 APEX1P27695 318 aaKnown RBP4.46□□□□□ -1.7
CD46-215ENST00000488596 SDHAP31040 664 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 SMAD3P84022 425 aaKnown RBP4.46□□□□□ -1.7
CD46-215ENST00000488596 OCRLQ01968 901 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 DDB1Q16531 1140 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 BRDTQ58F21 947 aaPredicted RBP4.46□□□□□ -1.7
CD46-215ENST00000488596 IQSEC1Q6DN90 963 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 PASD1Q8IV76 773 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 CMIPQ8IY22 773 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 RTF1Q92541 710 aaKnown RBP4.46□□□□□ -1.7
CD46-215ENST00000488596 SLC5A5Q92911 643 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 FOXRED1Q96CU9 486 aaPredicted RBP4.46□□□□□ -1.7
CD46-215ENST00000488596 CRAMP1Q96RY5 1269 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 GPHA2Q96T91 129 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 PRRX2Q99811 253 aa4.46□□□□□ -1.7
CD46-215ENST00000488596 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.45□□□□□ -1.7
CD46-215ENST00000488596 C2orf78A6NCI8 922 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 MAFO75444 373 aaPredicted RBP4.45□□□□□ -1.7
CD46-215ENST00000488596 PRKD3O94806 890 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 PEX11BO96011 259 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 CYP17A1P05093 508 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 ANTXR2P58335 489 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 ADAM8P78325 824 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 ITKQ08881 620 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 MTMR1Q13613 665 aa4.45□□□□□ -1.7
CD46-215ENST00000488596 TERF2Q15554 542 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms