RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 FAM228AQ86W67 206 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 DDX12PQ92771 950 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 STAMQ92783 540 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 REEP2Q9BRK0 252 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 IFT122Q9HBG6 1241 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 ERVK-5Q9HDB9 667 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 KMT5AQ9NQR1 393 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 SERTAD1Q9UHV2 236 aa17.38■□□□□ 0.37
C9orf3-219ENST00000488186 MYMKA6NI61 221 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 AMHP03971 560 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 SLFN14P0C7P3 912 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 IBSPP21815 317 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-219ENST00000488186 AFMP43652 599 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 FXR1P51114 621 aaKnown RBP eCLIP17.37■□□□□ 0.37
C9orf3-219ENST00000488186 EFNA5P52803 228 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 PCBP1Q15365 356 aaKnown RBP eCLIP17.37■□□□□ 0.37
C9orf3-219ENST00000488186 CNNM3Q8NE01 707 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 BSNDQ8WZ55 320 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 NFKBIZQ9BYH8 718 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 PARVGQ9HBI0 331 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 HPSEQ9Y251 543 aa17.37■□□□□ 0.37
C9orf3-219ENST00000488186 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-219ENST00000488186 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-219ENST00000488186 H0YCG3 227 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 GOLGA6L22H0YM25 854 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 K7ERI5 159 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 PRPF40AO75400 957 aaKnown RBP17.36■□□□□ 0.37
C9orf3-219ENST00000488186 ZNF202O95125 648 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 NPTX2P47972 431 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 ASIC1P78348 528 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 MAPK6Q16659 721 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 CCDC65Q8IXS2 484 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 DAW1Q8N136 415 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 PHOSPHO2Q8TCD6 241 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 PRMT7Q9NVM4 692 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-219ENST00000488186 KBTBD4Q9NVX7 518 aa17.36■□□□□ 0.37
C9orf3-219ENST00000488186 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-219ENST00000488186 PIN4Q9Y237 131 aaKnown RBP17.36■□□□□ 0.37
C9orf3-219ENST00000488186 FAM237AA0A1B0GTK4 181 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 ENPP3O14638 875 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 SLC16A4O15374 487 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 MAPK7Q13164 816 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 LONRF3Q496Y0 759 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 HERC4Q5GLZ8 1057 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-219ENST00000488186 FAM109BQ6ICB4 259 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-219ENST00000488186 KANK3Q6NY19 840 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 IFNLR1Q8IU57 520 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-219ENST00000488186 FAM178BQ8IXR5 827 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 MYOCDQ8IZQ8 938 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 SPIRE2Q8WWL2 714 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 ADAM2Q99965 735 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 ZBED2Q9BTP6 218 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 KIFC3Q9BVG8 833 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 GOLPH3LQ9H4A5 285 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 MINDY3Q9H8M7 445 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 CHST12Q9NRB3 414 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 PANK4Q9NVE7 773 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 CXXC1Q9P0U4 656 aaPredicted RBP17.35■□□□□ 0.37
C9orf3-219ENST00000488186 PHLPP2Q6ZVD8 1323 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 MICAL3Q7RTP6 2002 aa17.35■□□□□ 0.37
C9orf3-219ENST00000488186 TRAK2O60296 914 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 PRKCBP05771 671 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 SIP14410 1827 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 GAP43P17677 238 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 AXLP30530 894 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 WDR5P61964 334 aaKnown RBP17.34■□□□□ 0.37
C9orf3-219ENST00000488186 UBE2HP62256 183 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 MBTD1Q05BQ5 628 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 FAM160A1Q05DH4 1040 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 STRN3Q13033 797 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 TCTN1Q2MV58 587 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 CDCA2Q69YH5 1023 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-219ENST00000488186 TWF2Q6IBS0 349 aaKnown RBP17.34■□□□□ 0.37
C9orf3-219ENST00000488186 TMEM87AQ8NBN3 555 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 SLC17A8Q8NDX2 589 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 PAGE5Q96GU1 130 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 C7orf25Q9BPX7 421 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 TMX1Q9H3N1 280 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 C1orf112Q9NSG2 853 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 LRFN2Q9ULH4 789 aa17.34■□□□□ 0.37
C9orf3-219ENST00000488186 SZT2Q5T011 3432 aa17.33■□□□□ 0.37
C9orf3-219ENST00000488186 TMEM265A0A087WTH1 108 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 K7ENM7 598 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 ACTN4O43707 911 aaKnown RBP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 GADD45BO75293 160 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 UPP2O95045 317 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 ATP2A2P16615 1042 aaKnown RBP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 KRBA2Q6ZNG9 492 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 CCDC47Q96A33 483 aaKnown RBP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 DNAJC19Q96DA6 116 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 PRIMPOLQ96LW4 560 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 SLC9A7Q96T83 725 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 NTPCRQ9BSD7 190 aaKnown RBP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 TRIM9Q9C026 710 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 TSPYL2Q9H2G4 693 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-219ENST00000488186 BLZF1Q9H2G9 400 aa17.33■□□□□ 0.36
C9orf3-219ENST00000488186 MRPL44Q9H9J2 332 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms