RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 BFSP1Q12934 665 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 MYO1EQ12965 1108 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 ALCAMQ13740 583 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 KAZNQ674X7 775 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 AMIGO3Q86WK7 504 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 ZNF653Q96CK0 615 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 PANX2Q96RD6 677 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 PABPN1LA6NDY0 278 aaKnown RBP12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 GGCXP38435 758 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 LRRC71Q8N4P6 559 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 SMC1BQ8NDV3 1235 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 CHST13Q8NET6 341 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 DDX23Q9BUQ8 820 aaKnown RBP12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 CCSER1Q9C0I3 900 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 VCX3AQ9NNX9 186 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 PRDM5Q9NQX1 630 aaPredicted RBP12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 EIF4A3P38919 411 aaKnown RBP12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 KRT81Q14533 505 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 XKR3Q5GH77 459 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 SCFD2Q8WU76 684 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 HEXIM2Q96MH2 286 aaKnown RBP12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 RIC1Q4ADV7 1423 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 TADA3O75528 432 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 TKFCQ3LXA3 575 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 PROM2Q8N271 834 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 TRPM4Q8TD43 1214 aa12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 NOP53Q9NZM5 478 aaKnown RBP12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 FAF1Q9UNN5 650 aaPredicted RBP12.53□□□□□ -0.4
LDLRAP1-207ENST00000488127 CYP2C8P10632 490 aa12.52□□□□□ -0.4
LDLRAP1-207ENST00000488127 KCNH2Q12809 1159 aa12.52□□□□□ -0.4
LDLRAP1-207ENST00000488127 EMBQ6PCB8 327 aa12.52□□□□□ -0.4
LDLRAP1-207ENST00000488127 PPP4R3CPQ6ZMV5 832 aa12.52□□□□□ -0.4
LDLRAP1-207ENST00000488127 METTL23Q86XA0 190 aa12.52□□□□□ -0.4
LDLRAP1-207ENST00000488127 TSC22D3Q99576 134 aa12.52□□□□□ -0.4
LDLRAP1-207ENST00000488127 YIPF3Q9GZM5 350 aa12.52□□□□□ -0.4
LDLRAP1-207ENST00000488127 SSX2IPQ9Y2D8 614 aa12.52□□□□□ -0.4
LDLRAP1-207ENST00000488127 DHX9Q08211 1270 aaKnown RBP12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 CAPN12Q6ZSI9 719 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 IFT172Q9UG01 1749 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 PRKCEQ02156 737 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 CDCA5Q96FF9 252 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 CXorf56Q9H5V9 222 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 TOPORSQ9NS56 1045 aaPredicted RBP12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 SUCLA2Q9P2R7 463 aaPredicted RBP12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 SCOCQ9UIL1 159 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 NRXN3Q9Y4C0 1643 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 PFASO15067 1338 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 MYMKA6NI61 221 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 GH1P01241 217 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 BIRC2Q13490 618 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 KCNV1Q6PIU1 500 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 KCNB2Q92953 911 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 REEP2Q9BRK0 252 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 NFU1Q9UMS0 254 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 KCNH4Q9UQ05 1017 aa12.52□□□□□ -0.41
LDLRAP1-207ENST00000488127 NDC80O14777 642 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 MSH4O15457 936 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 SREBF2Q12772 1141 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 STK4Q13043 487 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 CDR2LQ86X02 465 aaPredicted RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 GMCL1Q96IK5 515 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 GCOM2Q9BZD3 368 aaPredicted RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 ARP10275 920 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 ZBED6P86452 979 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 ADCY1Q08828 1119 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 TYW1Q9NV66 732 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 MRC1P22897 1456 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 HMGB1P1B2RPK0 211 aaPredicted RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 CTIFO43310 598 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 MOCS3O95396 460 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 ADCY8P40145 1251 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 PLTPP55058 493 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 HERVK_113P62684 666 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 HADHQ16836 314 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 TRIM50Q86XT4 487 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 FBXO16Q8IX29 292 aaPredicted RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 GUF1Q8N442 669 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 LRRC8CQ8TDW0 803 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 P2RX7Q99572 595 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 LRRC4Q9HBW1 653 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 TUFT1Q9NNX1 390 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 DNAJC12Q9UKB3 198 aa12.51□□□□□ -0.41
LDLRAP1-207ENST00000488127 ESYT2A0FGR8 921 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 KIF1CO43896 1103 aaKnown RBP12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 SRGAP2O75044 1071 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 FTCDO95954 541 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 ABCD1P33897 745 aa12.5□□□□□ -0.41
LDLRAP1-207ENST00000488127 NTRK3Q16288 839 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms