RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 WDR59Q6PJI9 974 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 RAD9BQ6WBX8 426 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 TOGARAM2Q6ZUX3 1019 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 NYAP1Q6ZVC0 841 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 TMTC1Q8IUR5 882 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 EXOC8Q8IYI6 725 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 AFG1LQ8WV93 481 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 SOCS4Q8WXH5 440 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 PPP1R13BQ96KQ4 1090 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 PCMTD1Q96MG8 357 aaPredicted RBP10.33□□□□□ -0.76
SF3B1-211ENST00000487698 APBA2Q99767 749 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 C16orf70Q9BSU1 422 aa10.33□□□□□ -0.76
SF3B1-211ENST00000487698 ZHX1Q9UKY1 873 aaPredicted RBP10.33□□□□□ -0.76
SF3B1-211ENST00000487698 PPFIA4O75335 1185 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 PIGRP01833 764 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 CTGFP29279 349 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 CNGA1P29973 690 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
SF3B1-211ENST00000487698 RGS2P41220 211 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 BFSP1Q12934 665 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 DRP2Q13474 957 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 BRDTQ58F21 947 aaPredicted RBP10.32□□□□□ -0.76
SF3B1-211ENST00000487698 DCAF17Q5H9S7 520 aaPredicted RBP10.32□□□□□ -0.76
SF3B1-211ENST00000487698 CYP26C1Q6V0L0 522 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 XXYLT1Q8NBI6 393 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 BAP1Q92560 729 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 RNPEPQ9H4A4 650 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
SF3B1-211ENST00000487698 MMP3P08254 477 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 ZNF865P0CJ78 1059 aaPredicted RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 CDK17Q00537 523 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 CCL14Q16627 93 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 TCERG1LQ5VWI1 586 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 IER5Q5VY09 327 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 CDCA2Q69YH5 1023 aaPredicted RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 CYP4F22Q6NT55 531 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 INTS8Q75QN2 995 aaKnown RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 ZSWIM2Q8NEG5 633 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 NEK11Q8NG66 645 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 TCP11Q8WWU5 503 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 FBXL18Q96ME1 805 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 CRACR2AQ9BSW2 395 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 LSM14BQ9BX40 385 aaKnown RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 GANQ9H2C0 597 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 PCIF1Q9H4Z3 704 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 PLCB1Q9NQ66 1216 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 TRMT1Q9NXH9 659 aaKnown RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 CEP72Q9P209 647 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 PLAGL2Q9UPG8 496 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 TRPC6Q9Y210 931 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 GNEQ9Y223 722 aaKnown RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 PPP2R2CQ9Y2T4 447 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 PHLPP2Q6ZVD8 1323 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 COL1A2P08123 1366 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 LRRIQ4A6NIV6 560 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 TNPO2O14787 897 aaKnown RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 HNRNPDLO14979 420 aaKnown RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 CCP110O43303 1012 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 C22orf31O95567 290 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 ZNF286BP0CG31 522 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 GARTP22102 1010 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 TNFAIP2Q03169 654 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 ZNF484Q5JVG2 852 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 REXO1L1PQ8IX06 675 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 LINC01465Q8N7H1 131 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 ZNF397Q8NF99 534 aaPredicted RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 DEPTORQ8TB45 409 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 TRAPPC12Q8WVT3 735 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 PRPF31Q8WWY3 499 aaKnown RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 JPH2Q9BR39 696 aaPredicted RBP10.31□□□□□ -0.76
SF3B1-211ENST00000487698 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 STYXL1Q9Y6J8 313 aa10.31□□□□□ -0.76
SF3B1-211ENST00000487698 ADCY3O60266 1144 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
SF3B1-211ENST00000487698 ALDH1A1P00352 501 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 ADRB2P07550 413 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 PON1P27169 355 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 FMO5P49326 533 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 NOGQ13253 232 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 MXD4Q14582 209 aaPredicted RBP10.3□□□□□ -0.76
SF3B1-211ENST00000487698 PRAMEF19Q5SWL8 479 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 C1orf220Q5T0J3 134 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 PDXDC1Q6P996 788 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 LRRC71Q8N4P6 559 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 OR6J1Q8NGC5 347 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 PLEKHO2Q8TD55 490 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 PSPC1Q8WXF1 523 aaKnown RBP10.3□□□□□ -0.76
SF3B1-211ENST00000487698 C16orf45Q96MC5 204 aaPredicted RBP10.3□□□□□ -0.76
SF3B1-211ENST00000487698 CHP1Q99653 195 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 DESI2Q9BSY9 194 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 CCDC113Q9H0I3 377 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 SIX2Q9NPC8 291 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 ADGRG1Q9Y653 693 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 A6NJR5 290 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 LRRC53A6NM62 1247 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 ZSCAN12O43309 604 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 EDN1P05305 212 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 TRIM49P0CI25 452 aa10.3□□□□□ -0.76
SF3B1-211ENST00000487698 TRIM49CP0CI26 452 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms