RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 NT5C3AQ9H0P0 336 aa11.4□□□□□ -0.58
RNF220-215ENST00000487332 POLR3FQ9H1D9 316 aaPredicted RBP11.4□□□□□ -0.58
RNF220-215ENST00000487332 C2orf40Q9H1Z8 148 aa11.4□□□□□ -0.58
RNF220-215ENST00000487332 NSUN3Q9H649 340 aaKnown RBP11.4□□□□□ -0.58
RNF220-215ENST00000487332 CWH43Q9H720 699 aa11.4□□□□□ -0.58
RNF220-215ENST00000487332 LZTS1Q9Y250 596 aa11.4□□□□□ -0.58
RNF220-215ENST00000487332 FNDC1Q4ZHG4 1894 aaPredicted RBP11.4□□□□□ -0.59
RNF220-215ENST00000487332 TRANK1O15050 2925 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 FSD2A1L4K1 749 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 TBKBP1A7MCY6 615 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 INPPL1O15357 1258 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 NCK2O43639 380 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 TSPAN1O60635 241 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 ERLIN2O94905 339 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 EYA4O95677 639 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 FGFR1P11362 822 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 HOXA11P31270 313 aaPredicted RBP11.39□□□□□ -0.59
RNF220-215ENST00000487332 NAMPTP43490 491 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 PLCB3Q01970 1234 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 PPP2R5AQ15172 486 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 IL17AQ16552 155 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 ECM1Q16610 540 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 AMHR2Q16671 573 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 PAN2Q504Q3 1202 aaKnown RBP11.39□□□□□ -0.59
RNF220-215ENST00000487332 CLLU1OSQ5K130 101 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 FAM102BQ5T8I3 360 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 NOTUMQ6P988 496 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 PADI6Q6TGC4 694 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 MRPL10Q7Z7H8 261 aaKnown RBP11.39□□□□□ -0.59
RNF220-215ENST00000487332 EVPLQ92817 2033 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 KIFAP3Q92845 792 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 PGBD4Q96DM1 585 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 MMTAG2Q9BU76 263 aaKnown RBP11.39□□□□□ -0.59
RNF220-215ENST00000487332 MINDY3Q9H8M7 445 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 UBN1Q9NPG3 1134 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
RNF220-215ENST00000487332 KCND2Q9NZV8 630 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 PCDHB12Q9Y5F1 795 aa11.39□□□□□ -0.59
RNF220-215ENST00000487332 CSDE1O75534 798 aaKnown RBP11.38□□□□□ -0.59
RNF220-215ENST00000487332 SRGAP2CP0DJJ0 459 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 NCLP19338 710 aaKnown RBP11.38□□□□□ -0.59
RNF220-215ENST00000487332 SYT1P21579 422 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 GATMP50440 423 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 MRPS5P82675 430 aaKnown RBP11.38□□□□□ -0.59
RNF220-215ENST00000487332 NCBP1Q09161 790 aaKnown RBP11.38□□□□□ -0.59
RNF220-215ENST00000487332 RESTQ13127 1097 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 PDE12Q6L8Q7 609 aaKnown RBP11.38□□□□□ -0.59
RNF220-215ENST00000487332 ZBTB8OSQ8IWT0 167 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 MICALL1Q8N3F8 863 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 COLGALT1Q8NBJ5 622 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 KCNN1Q92952 543 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 HLA-CQ95604 372 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 ASB2Q96Q27 587 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 BHMT2Q9H2M3 363 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
RNF220-215ENST00000487332 DDX19AQ9NUU7 478 aaKnown RBP11.38□□□□□ -0.59
RNF220-215ENST00000487332 PRMT7Q9NVM4 692 aaPredicted RBP11.38□□□□□ -0.59
RNF220-215ENST00000487332 STK39Q9UEW8 545 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 PLAGL2Q9UPG8 496 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 KIAA1024Q9UPX6 916 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 DNM3Q9UQ16 869 aa11.38□□□□□ -0.59
RNF220-215ENST00000487332 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.37□□□□□ -0.59
RNF220-215ENST00000487332 VPS37CA5D8V6 355 aaPredicted RBP11.37□□□□□ -0.59
RNF220-215ENST00000487332 GRM6O15303 877 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 ITGB1P05556 798 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 GUCY2CP25092 1073 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 LONP1P36776 959 aaKnown RBP11.37□□□□□ -0.59
RNF220-215ENST00000487332 CCDC85BQ15834 202 aaPredicted RBP11.37□□□□□ -0.59
RNF220-215ENST00000487332 TMEM119Q4V9L6 283 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 UBXN11Q5T124 520 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 GLB1LQ6UWU2 654 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 HSCBQ8IWL3 235 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 SPPL3Q8TCT6 385 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 PPM1EQ8WY54 764 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 PPP2R3CQ969Q6 453 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 PABPC5Q96DU9 382 aaKnown RBP11.37□□□□□ -0.59
RNF220-215ENST00000487332 DRC1Q96MC2 740 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 ZNF558Q96NG5 402 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 CCDC113Q9H0I3 377 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 CSRNP2Q9H175 543 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 FZD8Q9H461 694 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 C17orf75Q9HAS0 396 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 TYW1Q9NV66 732 aaKnown RBP11.37□□□□□ -0.59
RNF220-215ENST00000487332 PCDHB2Q9Y5E7 798 aa11.37□□□□□ -0.59
RNF220-215ENST00000487332 VWA3AA6NCI4 1184 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 LRRIQ4A6NIV6 560 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 PP2D1A8MPX8 630 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 FSCN2O14926 492 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 FGF18O76093 207 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 ARF4P18085 180 aaPredicted RBP11.36□□□□□ -0.59
RNF220-215ENST00000487332 EFNA5P52803 228 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 CAMK1Q14012 370 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 NOMO2Q5JPE7 1267 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 SLC27A1Q6PCB7 646 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 KCNT2Q6UVM3 1135 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 AGMOQ6ZNB7 445 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 LRRC55Q6ZSA7 311 aa11.36□□□□□ -0.59
RNF220-215ENST00000487332 HACE1Q8IYU2 909 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms