RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TPH2Q8IWU9 490 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 C4orf19Q8IY42 314 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 NME8Q8N427 588 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 APBB2Q92870 758 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 TOP1MTQ969P6 601 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 CEP170P1Q96L14 293 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 MAP7D2Q96T17 732 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 HSD17B14Q9BPX1 270 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 CYP26B1Q9NR63 512 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 MTUS1Q9ULD2 1270 aa8.01□□□□□ -1.13
UBE4B-209ENST00000487244 LINC01553A4QN01 128 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 PP2D1A8MPX8 630 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 H3BQV1 296 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 MAFO75444 373 aaPredicted RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 RPLP2P05387 115 aaKnown RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 FOSL2P15408 326 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 JUNDP17535 347 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 IBSPP21815 317 aaPredicted RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 TRAPPC10P48553 1259 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 RPIAP49247 311 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 GATMP50440 423 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 GPC3P51654 580 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 CRYBB1P53674 252 aaPredicted RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 HTRA4P83105 476 aaPredicted RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 EMC2Q15006 297 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 CSPP1Q1MSJ5 1256 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 XKR9Q5GH70 373 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 LARP1BQ659C4 914 aaKnown RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 FERMT3Q86UX7 667 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 USP38Q8NB14 1042 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 PIGOQ8TEQ8 1089 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 GDPD5Q8WTR4 605 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 ARNTL2Q8WYA1 636 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 TMEM143Q96AN5 459 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 RAD9AQ99638 391 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 DHX33Q9H6R0 707 aaKnown RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 ZSWIM4Q9H7M6 989 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 RC3H2Q9HBD1 1191 aaKnown RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 XPNPEP1Q9NQW7 623 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 NOL7Q9UMY1 257 aaKnown RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 ST3GAL5Q9UNP4 418 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 KIF3AQ9Y496 699 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 ZSCAN21Q9Y5A6 473 aaPredicted RBP8□□□□□ -1.13
UBE4B-209ENST00000487244 SQORQ9Y6N5 450 aa8□□□□□ -1.13
UBE4B-209ENST00000487244 A0A087WZ62 844 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 VPS37CA5D8V6 355 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 K7ELQ4 463 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 GFRA3O60609 400 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 RPS6KA5O75582 802 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 LYPLA2O95372 231 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 LINC00271P0C7V0 271 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 DARSP14868 501 aaKnown RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 TMOD1P28289 359 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 RARRES1P49788 294 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 POLGP54098 1239 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 ORC2Q13416 577 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 DSC3Q14574 896 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 ECM1Q16610 540 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 ZNF598Q86UK7 904 aaKnown RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 CATSPER3Q86XQ3 398 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 RHPN2Q8IUC4 686 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 MAFAQ8NHW3 353 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 PRR7Q8TB68 274 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 SLC7A3Q8WY07 619 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 NLRP4Q96MN2 994 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 SCLT1Q96NL6 688 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 YME1L1Q96TA2 773 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 ADAM2Q99965 735 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 FDXACB1Q9BRP7 624 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 C17orf80Q9BSJ5 609 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 FAM117AQ9C073 453 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 PLXNA4Q9HCM2 1894 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 SUCLA2Q9P2R7 463 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-209ENST00000487244 INSL6Q9Y581 213 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 MYH11P35749 1972 aa7.99□□□□□ -1.13
UBE4B-209ENST00000487244 DENND3A2RUS2 1198 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 C9IYK1 514 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 LPXNO60711 386 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 USO1O60763 962 aaKnown RBP7.98□□□□□ -1.13
UBE4B-209ENST00000487244 DKC1O60832 514 aaKnown RBP eCLIP7.98□□□□□ -1.13
UBE4B-209ENST00000487244 SYT1P21579 422 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 IGFBP4P22692 258 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 EIF4BP23588 611 aaKnown RBP7.98□□□□□ -1.13
UBE4B-209ENST00000487244 CDC25AP30304 524 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 RFC5P40937 340 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 ATP2C1P98194 919 aaPredicted RBP7.98□□□□□ -1.13
UBE4B-209ENST00000487244 LAMTOR4Q0VGL1 99 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 LAPTM4AQ15012 233 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 PAN2Q504Q3 1202 aaKnown RBP7.98□□□□□ -1.13
UBE4B-209ENST00000487244 RILPL1Q5EBL4 403 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 FAM173BQ6P4H8 233 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 IGSF22Q8N9C0 903 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 NEK9Q8TD19 979 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 ASAP3Q8TDY4 903 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 PRPF31Q8WWY3 499 aaKnown RBP7.98□□□□□ -1.13
UBE4B-209ENST00000487244 MMTAG2Q9BU76 263 aaKnown RBP7.98□□□□□ -1.13
UBE4B-209ENST00000487244 FTHL17Q9BXU8 183 aa7.98□□□□□ -1.13
UBE4B-209ENST00000487244 MINDY3Q9H8M7 445 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms