RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CISD2Q8N5K1 135 aaKnown RBP4.89□□□□□ -1.63
SNRNP27-204ENST00000487029 USP7Q93009 1102 aa4.89□□□□□ -1.63
SNRNP27-204ENST00000487029 TYW1Q9NV66 732 aaKnown RBP4.89□□□□□ -1.63
SNRNP27-204ENST00000487029 DDX56Q9NY93 547 aaKnown RBP4.89□□□□□ -1.63
SNRNP27-204ENST00000487029 PTGFRNQ9P2B2 879 aa4.89□□□□□ -1.63
SNRNP27-204ENST00000487029 B4GALT6Q9UBX8 382 aa4.89□□□□□ -1.63
SNRNP27-204ENST00000487029 ZKSCAN5Q9Y2L8 839 aa4.89□□□□□ -1.63
SNRNP27-204ENST00000487029 XDHP47989 1333 aa4.89□□□□□ -1.63
SNRNP27-204ENST00000487029 A0A1W2PRX2 142 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 ZNF891A8MT65 544 aaPredicted RBP4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 ALG1L2C9J202 215 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 ZNF561-AS1K7EIQ3 104 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 BRINP1O60477 761 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 GAS7O60861 476 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 BPIP17213 487 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 NR4A1P22736 598 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 ADCY7P51828 1080 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 DSG1Q02413 1049 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 CNGB1Q14028 1251 aaPredicted RBP4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 SART3Q15020 963 aaKnown RBP4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 ARHGAP44Q17R89 818 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 COLEC12Q5KU26 742 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 GAREM2Q75VX8 874 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 PRIMA1Q86XR5 153 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 ANKRD35Q8N283 1001 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 NXPE1Q8N323 547 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 C2orf69Q8N8R5 385 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 RABGGTAQ92696 567 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 HAS1Q92839 578 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 MIEF2Q96C03 454 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 TTC1Q99614 292 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 RIOX1Q9H6W3 641 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 IFT22Q9H7X7 185 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 HOMER2Q9NSB8 354 aa4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 CTDP1Q9Y5B0 961 aaPredicted RBP4.88□□□□□ -1.63
SNRNP27-204ENST00000487029 POLR2AP24928 1970 aaKnown RBP4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 PTPDC1A2A3K4 754 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 ZEB2O60315 1214 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 RAB11FIP3O75154 756 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 MMEP08473 750 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 MAN2A2P49641 1150 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 C21orf58P58505 322 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 EVA1CP58658 441 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 IL2P60568 153 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 STAT4Q14765 748 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 FIGNQ5HY92 759 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 ZKSCAN2Q63HK3 967 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 FSTL4Q6MZW2 842 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 OTOP1Q7RTM1 612 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 SMC1BQ8NDV3 1235 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 WDR66Q8TBY9 1149 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 BBC3Q96PG8 261 aaPredicted RBP4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 GPHA2Q96T91 129 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 SMURF1Q9HCE7 757 aa4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 APOBEC2Q9Y235 224 aaKnown RBP4.87□□□□□ -1.63
SNRNP27-204ENST00000487029 COL4A3Q01955 1670 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 SLC12A8A0AV02 714 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 KLRG2A4D1S0 409 aaPredicted RBP4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 GRID2IPA4D2P6 1211 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 NEMP1O14524 444 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 GPR39O43194 453 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 ATP2A2P16615 1042 aaKnown RBP4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 ZNF37AP17032 561 aaPredicted RBP4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 PTGS2P35354 604 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 LSSP48449 732 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 RABGGTBP53611 331 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 HERVK_113P62684 666 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 ADAM8P78325 824 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 OCRLQ01968 901 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 RNF219Q5W0B1 726 aaPredicted RBP4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 NECAB2Q7Z6G3 386 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 SPATS2Q86XZ4 545 aaKnown RBP4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 SLC25A43Q8WUT9 341 aaPredicted RBP4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 STAG1Q8WVM7 1258 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 BOCQ9BWV1 1114 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 THG1LQ9NWX6 298 aaKnown RBP4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 TRPS1Q9UHF7 1281 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 ZNHIT2Q9UHR6 403 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 PACSIN3Q9UKS6 424 aa4.86□□□□□ -1.63
SNRNP27-204ENST00000487029 RASSF10A6NK89 507 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 FKBP9O95302 570 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 PDGFRBP09619 1106 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 ADCYAP1R1P41586 468 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 ELAVL1Q15717 326 aaKnown RBP4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 PLEKHG6Q3KR16 790 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 C1QL3Q5VWW1 255 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 EP400NLQ6ZTU2 488 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 LHFPL2Q6ZUX7 228 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 FKBP9P1Q75LS8 142 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 C11orf74Q86VG3 221 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 CHTF18Q8WVB6 975 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 ASB15Q8WXK1 588 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 LENG9Q96B70 501 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 RPL10LQ96L21 214 aaKnown RBP4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 GPR101Q96P66 508 aaPredicted RBP4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 GPR87Q9BY21 358 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 SYNPO2LQ9H987 977 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 MAGEL2Q9UJ55 1249 aa4.85□□□□□ -1.63
SNRNP27-204ENST00000487029 PHLDB1Q86UU1 1377 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms