RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NT5DC3Q86UY8 548 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 RASGEF1CQ8N431 466 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 CASKIN2Q8WXE0 1202 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 IFT81Q8WYA0 676 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 RFFLQ8WZ73 363 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 ESYT3A0FGR9 886 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 TISP43B9A030 160 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 GOLGA8KD6RF30 607 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 MAPK13O15264 365 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 HSF2BPO75031 334 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 ZNF280AP59817 542 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 SNRPFP62306 86 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 CETN1Q12798 172 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 ARHGAP44Q17R89 818 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 HAUS6Q7Z4H7 955 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 KLHL7Q8IXQ5 586 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 VTI1AQ96AJ9 217 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 HES6Q96HZ4 224 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 CCDC43Q96MW1 224 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.716e-10■■■■□ 20
PDLIM7-207ENST00000486828 CBWD1Q9BRT8 395 aa19.51■□□□□ 0.71
PDLIM7-207ENST00000486828 GOLGA6CA6NDK9 693 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 GOLGA6DP0CG33 693 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 VCAM1P19320 739 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 TNFAIP3P21580 790 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 JAK3P52333 1124 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 PSMC5P62195 406 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 UGCGQ16739 394 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 PTPROQ16827 1216 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 MREGQ8N565 214 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 XXYLT1Q8NBI6 393 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 FAM76AQ8TAV0 307 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 SLC35G2Q8TBE7 412 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 CTNNBL1Q8WYA6 563 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 JDP2Q8WYK2 163 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 PDCD2LQ9BRP1 358 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 GOLGA6AQ9NYA3 693 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 HSPBP1Q9NZL4 362 aa19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 NOC2LQ9Y3T9 749 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 CTDP1Q9Y5B0 961 aaPredicted RBP19.5■□□□□ 0.71
PDLIM7-207ENST00000486828 FOXN3O00409 490 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 BACH1O14867 736 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 ZBED4O75132 1171 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 FAM153BP0C7A2 387 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 MYCLP12524 364 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 NCKAP1LP55160 1127 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 PPP3CAQ08209 521 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 MTMR2Q13614 643 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 FAM153CQ494X1 144 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 EPC2Q52LR7 807 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 EIF1ADQ8N9N8 165 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 TRERF1Q96PN7 1200 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 IWS1Q96ST2 819 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 RUFY1Q96T51 708 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 RMDN3Q96TC7 470 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 PLEKHA4Q9H4M7 779 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 OSGEPQ9NPF4 335 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 PXMP2Q9NR77 195 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 CWC15Q9P013 229 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 FAM153AQ9UHL3 310 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 AMFRQ9UKV5 643 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 WDR64B1ANS9 1081 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 CCDC188H7C350 402 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 SFNP31947 248 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 PPATQ06203 517 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 PPFIA1Q13136 1202 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 C1orf220Q5T0J3 134 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 RNF207Q6ZRF8 634 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 SLC17A8Q8NDX2 589 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 WHAMMQ8TF30 809 aa19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 RPAP3Q9H6T3 665 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-207ENST00000486828 IGSF9BQ9UPX0 1349 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 TMEM150BA6NC51 233 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 BUB1BO60566 1050 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 ATP9AO75110 1047 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 CCNE2O96020 404 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 EGFRP00533 1210 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 FDX1P10109 184 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 KRT76Q01546 638 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 AGPAT1Q99943 283 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 SH2D3AQ9BRG2 576 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 UBE2TQ9NPD8 197 aaPredicted RBP19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 ANKEF1Q9NU02 776 aa19.48■□□□□ 0.71
PDLIM7-207ENST00000486828 ANKRD62A6NC57 917 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 PMM2O15305 246 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 SLC16A4O15374 487 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 LRRN2O75325 713 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 IVLP07476 585 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 ABCB4P21439 1286 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 PEX3P56589 373 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 ARHGEF19Q8IW93 802 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 HOMEZQ8IX15 550 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 ZIM3Q96PE6 472 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 AP1M1Q9BXS5 423 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 ISCUQ9H1K1 167 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 TAF1DQ9H5J8 278 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 GPRC5CQ9NQ84 441 aa19.47■□□□□ 0.71
PDLIM7-207ENST00000486828 TCEAL9Q9UHQ7 104 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms