RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 CMIPQ8IY22 773 aa7.4□□□□□ -1.22
LTN1-206ENST00000486427 PIK3C3Q8NEB9 887 aa7.4□□□□□ -1.22
LTN1-206ENST00000486427 GAB3Q8WWW8 586 aa7.4□□□□□ -1.22
LTN1-206ENST00000486427 TMEM176AQ96HP8 235 aa7.4□□□□□ -1.22
LTN1-206ENST00000486427 MSL2Q9HCI7 577 aa7.4□□□□□ -1.22
LTN1-206ENST00000486427 PLA2G3Q9NZ20 509 aa7.4□□□□□ -1.22
LTN1-206ENST00000486427 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.4□□□□□ -1.22
LTN1-206ENST00000486427 TCAF1Q9Y4C2 921 aa7.4□□□□□ -1.22
LTN1-206ENST00000486427 LPLP06858 475 aa7.39□□□□□ -1.23
LTN1-206ENST00000486427 COMTP21964 271 aa7.39□□□□□ -1.23
LTN1-206ENST00000486427 MSX2P35548 267 aaPredicted RBP7.39□□□□□ -1.23
LTN1-206ENST00000486427 PPARAQ07869 468 aa7.39□□□□□ -1.23
LTN1-206ENST00000486427 GRM7Q14831 915 aa7.39□□□□□ -1.23
LTN1-206ENST00000486427 POLNQ7Z5Q5 900 aa7.39□□□□□ -1.23
LTN1-206ENST00000486427 NELFAQ9H3P2 528 aa7.39□□□□□ -1.23
LTN1-206ENST00000486427 PRSS50Q9UI38 385 aa7.39□□□□□ -1.23
LTN1-206ENST00000486427 GPR39O43194 453 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 DAPK3O43293 454 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 FSBPO95073 299 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 LY86O95711 162 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 VSIG10L2P0DP72 767 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 MAN2A1Q16706 1144 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 EAF2Q96CJ1 260 aaPredicted RBP7.38□□□□□ -1.23
LTN1-206ENST00000486427 GPR20Q99678 358 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 WNT8AQ9H1J5 351 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 KCTD10Q9H3F6 313 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 C14orf93Q9H972 538 aaKnown RBP7.38□□□□□ -1.23
LTN1-206ENST00000486427 SPC25Q9HBM1 224 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 EVLQ9UI08 416 aaPredicted RBP7.38□□□□□ -1.23
LTN1-206ENST00000486427 KCNG1Q9UIX4 513 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 TSC22D4Q9Y3Q8 395 aa7.38□□□□□ -1.23
LTN1-206ENST00000486427 A0A1W2PRX2 142 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 GOLGA8BA8MQT2 603 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 DNAJC6O75061 913 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 PRKD3O94806 890 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 ACO1P21399 889 aaKnown RBP7.37□□□□□ -1.23
LTN1-206ENST00000486427 KIR2DL3P43628 341 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 GPR15P49685 360 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 GAGE13Q4V321 117 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 IQSEC1Q6DN90 963 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 UNC5BQ8IZJ1 945 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 WDR66Q8TBY9 1149 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 COG1Q8WTW3 980 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 UIMC1Q96RL1 719 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 ADOQ96SZ5 270 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 ING3Q9NXR8 418 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 EDARQ9UNE0 448 aa7.37□□□□□ -1.23
LTN1-206ENST00000486427 UBE2QL1A1L167 161 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 C1QTNF3-AMACRE9PGA6 284 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 MUSKO15146 869 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 JUNP05412 331 aaKnown RBP7.36□□□□□ -1.23
LTN1-206ENST00000486427 INSRRP14616 1297 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 CPEP16870 476 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 LGALS4P56470 323 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 MGAT5Q09328 741 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 FSCN1Q16658 493 aaKnown RBP7.36□□□□□ -1.23
LTN1-206ENST00000486427 UGT8Q16880 541 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 HS1BP3Q53T59 392 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 KRT40Q6A162 431 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 MAMDC4Q6UXC1 1216 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 GGNQ86UU5 652 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 ZNF808Q8N4W9 903 aaPredicted RBP7.36□□□□□ -1.23
LTN1-206ENST00000486427 ATL2Q8NHH9 583 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 EDAQ92838 391 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 TMX1Q9H3N1 280 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 IL23AQ9NPF7 189 aa7.36□□□□□ -1.23
LTN1-206ENST00000486427 A0A1W2PR48 441 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 ALDH1A2O94788 518 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 ENPP1P22413 925 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 SCAND1P57086 179 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 CCDC178Q5BJE1 867 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 DDX42Q86XP3 938 aaKnown RBP eCLIP7.35□□□□□ -1.23
LTN1-206ENST00000486427 SPATS2Q86XZ4 545 aaKnown RBP7.35□□□□□ -1.23
LTN1-206ENST00000486427 MSL3Q8N5Y2 521 aaKnown RBP7.35□□□□□ -1.23
LTN1-206ENST00000486427 OR14C36Q8NHC7 312 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 TGFBRAP1Q8WUH2 860 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 LMBR1Q8WVP7 490 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 ACAP3Q96P50 834 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 HECAQ9UBI9 543 aaPredicted RBP7.35□□□□□ -1.23
LTN1-206ENST00000486427 SH3BP1Q9Y3L3 701 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 CDY2AQ9Y6F7 541 aa7.35□□□□□ -1.23
LTN1-206ENST00000486427 GOLGA8AA7E2F4 631 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 MTSS1O43312 755 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 NRP2O60462 931 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 XPAP23025 273 aaPredicted RBP7.34□□□□□ -1.23
LTN1-206ENST00000486427 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.34□□□□□ -1.23
LTN1-206ENST00000486427 SPDYAQ5MJ70 313 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 SPTY2D1Q68D10 685 aaPredicted RBP7.34□□□□□ -1.23
LTN1-206ENST00000486427 SPRED1Q7Z699 444 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 D2HGDHQ8N465 521 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 RSAD2Q8WXG1 361 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 CDK5RAP1Q96SZ6 601 aaKnown RBP7.34□□□□□ -1.23
LTN1-206ENST00000486427 C14orf119Q9NWQ9 140 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 NCDNQ9UBB6 729 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 RCAN3Q9UKA8 241 aa7.34□□□□□ -1.23
LTN1-206ENST00000486427 PHLDB1Q86UU1 1377 aa7.33□□□□□ -1.24
LTN1-206ENST00000486427 PRKD1Q15139 912 aaPredicted RBP7.33□□□□□ -1.24
LTN1-206ENST00000486427 RNF187Q5TA31 235 aaPredicted RBP7.33□□□□□ -1.24
LTN1-206ENST00000486427 RNF219Q5W0B1 726 aaPredicted RBP7.33□□□□□ -1.24
LTN1-206ENST00000486427 FAM111BQ6SJ93 734 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms