RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 HDAC6Q9UBN7 1215 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 CCDC39Q9UFE4 941 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 NOD1Q9Y239 953 aa6.28□□□□□ -1.4
COPS3-208ENST00000486032 MYH9P35579 1960 aaKnown RBP6.27□□□□□ -1.4
COPS3-208ENST00000486032 EMSYQ7Z589 1322 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 IGSF9BQ9UPX0 1349 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 KDM3AQ9Y4C1 1321 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 DNAH12Q6ZR08 3092 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 A0A087X0B3 334 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 IGKV6D-21A0A0A0MT36 114 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 A0A0U1RQG5 324 aaPredicted RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 C17orf102A2RUQ5 167 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 ARHGEF35A5YM69 484 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 POLR2DO15514 142 aaKnown RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 HBP1O60381 514 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 USO1O60763 962 aaKnown RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 PQBP1O60828 265 aaKnown RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 CABYRO75952 493 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 F2P00734 622 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 SPATA31C1P0DKV0 1188 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 SMIM10L2AP0DMW4 78 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 SMIM10L2BP0DMW5 78 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 INSRRP14616 1297 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 PFKFB1P16118 471 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 SYN1P17600 705 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 PLCG1P19174 1290 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 RPA1P27694 616 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 YWHABP31946 246 aaKnown RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 RAD51AP2Q09MP3 1159 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 PPFIA1Q13136 1202 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 GRB10Q13322 594 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 MCM6Q14566 821 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 GRIK4Q16099 956 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 XKR3Q5GH77 459 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 CCSAPQ6IQ19 270 aaPredicted RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 CCDC73Q6ZRK6 1079 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 RIPOR1Q6ZS17 1223 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 OTUD6AQ7L8S5 288 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 PLPPR4Q7Z2D5 763 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 KCNK18Q7Z418 384 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 NECAB2Q7Z6G3 386 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 AFAP1L1Q8TED9 768 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 MRPS27Q92552 414 aaKnown RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 GTPBP3Q969Y2 492 aaKnown RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 AK8Q96MA6 479 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 NACC1Q96RE7 527 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 PPP1R16BQ96T49 567 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 HSD17B14Q9BPX1 270 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 POLR3CQ9BUI4 534 aaPredicted RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 CCSER1Q9C0I3 900 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 NT5C3AQ9H0P0 336 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 GOLPH3LQ9H4A5 285 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 SUGCTQ9HAC7 445 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 POLD4Q9HCU8 107 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 SERTAD1Q9UHV2 236 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 KCNH3Q9ULD8 1083 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 PHF24Q9UPV7 400 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 DNM3Q9UQ16 869 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 ATP11BQ9Y2G3 1177 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 MAFBQ9Y5Q3 323 aaPredicted RBP6.27□□□□□ -1.41
COPS3-208ENST00000486032 LTBP2Q14767 1821 aa6.27□□□□□ -1.41
COPS3-208ENST00000486032 H0YGN5 161 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 ARVCFO00192 962 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 HAS3O00219 553 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 GNB5O14775 395 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 TREHO43280 583 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 KRT18P05783 430 aaKnown RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 PLA2G4BP0C869 781 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 CYP2C9P11712 490 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 LIG1P18858 919 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 CMA1P23946 247 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 ITGB8P26012 769 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 KLRC1P26715 233 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 SYKP43405 635 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 AFMP43652 599 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 GATA4P43694 442 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 NDUFA8P51970 172 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 NKX3-2P78367 333 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 TBC1D8BQ0IIM8 1120 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 RSPO4Q2I0M5 234 aaPredicted RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 TRIM60Q495X7 471 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 TMEM119Q4V9L6 283 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 RESP18Q5W5W9 173 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 GDF6Q6KF10 455 aaPredicted RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 SLC39A5Q6ZMH5 540 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 ANO5Q75V66 913 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 C4orf19Q8IY42 314 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 GRAMD1CQ8IYS0 662 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 CEP57L1Q8IYX8 460 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 C7orf61Q8IZ16 206 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 LRRC71Q8N4P6 559 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 METTL13Q8N6R0 699 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 ATP8B4Q8TF62 1192 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 ZNF668Q96K58 619 aaPredicted RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 FAM167AQ96KS9 214 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 FAM49AQ9H0Q0 323 aaPredicted RBP6.26□□□□□ -1.41
COPS3-208ENST00000486032 TRPV6Q9H1D0 765 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 BHMT2Q9H2M3 363 aa6.26□□□□□ -1.41
COPS3-208ENST00000486032 ZHX3Q9H4I2 956 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms