RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 KIFAP3Q92845 792 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 CLP1Q92989 425 aaKnown RBP13.86□□□□□ -0.19
PTCD1-205ENST00000485746 AK8Q96MA6 479 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 TRIM6Q9C030 488 aaPredicted RBP13.86□□□□□ -0.19
PTCD1-205ENST00000485746 C2orf40Q9H1Z8 148 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
PTCD1-205ENST00000485746 POLD4Q9HCU8 107 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 AGPAT5Q9NUQ2 364 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 TYW1Q9NV66 732 aaKnown RBP13.86□□□□□ -0.19
PTCD1-205ENST00000485746 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 CLIC4Q9Y696 253 aa13.86□□□□□ -0.19
PTCD1-205ENST00000485746 GBF1Q92538 1859 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 MARCKSP29966 332 aaPredicted RBP13.85□□□□□ -0.19
PTCD1-205ENST00000485746 LONP1P36776 959 aaKnown RBP13.85□□□□□ -0.19
PTCD1-205ENST00000485746 NAALADL2Q58DX5 795 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 FAM173BQ6P4H8 233 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 NOTUMQ6P988 496 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 LPPQ93052 612 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 MRPL38Q96DV4 380 aaKnown RBP13.85□□□□□ -0.19
PTCD1-205ENST00000485746 CPB2Q96IY4 423 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 CASD1Q96PB1 797 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 INPP5FQ9Y2H2 1132 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 PCDHB2Q9Y5E7 798 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 SIP14410 1827 aa13.85□□□□□ -0.19
PTCD1-205ENST00000485746 SZT2Q5T011 3432 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 C5orf67F2Z3F1 127 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 PDIA4P13667 645 aaKnown RBP13.84□□□□□ -0.19
PTCD1-205ENST00000485746 LAG3P18627 525 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 RNASELQ05823 741 aaKnown RBP13.84□□□□□ -0.19
PTCD1-205ENST00000485746 MBTD1Q05BQ5 628 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 GLB1LQ6UWU2 654 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 THNSL1Q8IYQ7 743 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 HACE1Q8IYU2 909 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 LRRC43Q8N309 656 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 KLHL23Q8NBE8 558 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 URGCPQ8TCY9 931 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 ZNF396Q96N95 335 aaPredicted RBP13.84□□□□□ -0.19
PTCD1-205ENST00000485746 MMTAG2Q9BU76 263 aaKnown RBP13.84□□□□□ -0.19
PTCD1-205ENST00000485746 MRPL9Q9BYD2 267 aaKnown RBP13.84□□□□□ -0.19
PTCD1-205ENST00000485746 LMAN2LQ9H0V9 348 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 ALG13Q9NP73 1137 aaKnown RBP13.84□□□□□ -0.19
PTCD1-205ENST00000485746 PRDM6Q9NQX0 595 aa13.84□□□□□ -0.19
PTCD1-205ENST00000485746 PRMT7Q9NVM4 692 aaPredicted RBP13.84□□□□□ -0.19
PTCD1-205ENST00000485746 SLC26A4O43511 780 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 TSPAN1O60635 241 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 HIP1RO75146 1068 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 PLA2G4BP0C869 781 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 ITGA4P13612 1032 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.2
PTCD1-205ENST00000485746 TXLNAP40222 546 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 NAMPTP43490 491 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 DHX8Q14562 1220 aaKnown RBP13.83□□□□□ -0.2
PTCD1-205ENST00000485746 STK38Q15208 465 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 MAPK6Q16659 721 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 TIGD5Q53EQ6 642 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 CLLU1OSQ5K130 101 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 EP400NLQ6ZTU2 488 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
PTCD1-205ENST00000485746 KCTD17Q8N5Z5 321 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 COLGALT1Q8NBJ5 622 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 CNNM3Q8NE01 707 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 MICAL1Q8TDZ2 1067 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 P2RX5Q93086 422 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 CCDC51Q96ER9 411 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 DRC1Q96MC2 740 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 ZNF558Q96NG5 402 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 FAM193BQ96PV7 902 aaPredicted RBP13.83□□□□□ -0.2
PTCD1-205ENST00000485746 TRAIPQ9BWF2 469 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 APOL6Q9BWW8 343 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 CSRNP2Q9H175 543 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 RNF19AQ9NV58 838 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 THEGQ9P2T0 379 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 PLAGL2Q9UPG8 496 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 PTPRSQ13332 1948 aa13.83□□□□□ -0.2
PTCD1-205ENST00000485746 GRM6O15303 877 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 ZNF623O75123 536 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 PRKCBP05771 671 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 KRT18P05783 430 aaKnown RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 ARF4P18085 180 aaPredicted RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 EFNA5P52803 228 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 KRT17Q04695 432 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 RAD51AP2Q09MP3 1159 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 DMP1Q13316 513 aaPredicted RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 PRPF4BQ13523 1007 aaKnown RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 NOMO2Q5JPE7 1267 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 SPECC1Q5M775 1068 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 HYIQ5T013 277 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 KCNK18Q7Z418 384 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 ZNF598Q86UK7 904 aaKnown RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 SYT2Q8N9I0 419 aaPredicted RBP13.82□□□□□ -0.2
PTCD1-205ENST00000485746 BSNDQ8WZ55 320 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 PPP2R3CQ969Q6 453 aa13.82□□□□□ -0.2
PTCD1-205ENST00000485746 PNMA5Q96PV4 448 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms