RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CASP10Q92851 521 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 PBXIP1Q96AQ6 731 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 TMEM169Q96HH4 297 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 CEP170P1Q96L14 293 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 NRDE2Q9H7Z3 1164 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 IFT122Q9HBG6 1241 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 BMP2KQ9NSY1 1161 aaPredicted RBP21.55■■□□□ 1.04
COL27A1-205ENST00000485397 TBC1D13Q9NVG8 400 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 ZNF318Q5VUA4 2279 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 STK36Q9NRP7 1315 aa21.55■■□□□ 1.04
COL27A1-205ENST00000485397 PFKFB2O60825 505 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 OFD1O75665 1012 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 P4HBP07237 508 aaKnown RBP21.54■■□□□ 1.04
COL27A1-205ENST00000485397 SKIP12755 728 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 NOMO2Q5JPE7 1267 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 GLB1LQ6UWU2 654 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 VPS52Q8N1B4 723 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 AUTS2Q8WXX7 1259 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 TMEM143Q96AN5 459 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 COL4A3BPQ9Y5P4 624 aa21.54■■□□□ 1.04
COL27A1-205ENST00000485397 DKC1O60832 514 aaKnown RBP eCLIP21.53■■□□□ 1.04
COL27A1-205ENST00000485397 ZNF623O75123 536 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 CTDNEP1O95476 244 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 GALTP07902 379 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 GCFC2P16383 781 aaKnown RBP21.53■■□□□ 1.04
COL27A1-205ENST00000485397 XBP1P17861 261 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 POLGP54098 1239 aaPredicted RBP21.53■■□□□ 1.04
COL27A1-205ENST00000485397 EPHA7Q15375 998 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 POTEDQ86YR6 584 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 BCL7CQ8WUZ0 217 aaPredicted RBP21.53■■□□□ 1.04
COL27A1-205ENST00000485397 PRPF31Q8WWY3 499 aaKnown RBP21.53■■□□□ 1.04
COL27A1-205ENST00000485397 SLC7A3Q8WY07 619 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 ZBP1Q9H171 429 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 DHX33Q9H6R0 707 aaKnown RBP21.53■■□□□ 1.04
COL27A1-205ENST00000485397 RGL1Q9NZL6 768 aa21.53■■□□□ 1.04
COL27A1-205ENST00000485397 FAM205CA6NFA0 338 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 MARCH6O60337 910 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 SRGAP2CP0DJJ0 459 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 RAB27AP51159 221 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 TPRNQ4KMQ1 711 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 NCAPH2Q6IBW4 605 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 IGSF21Q96ID5 467 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 DYDC2Q96IM9 177 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 LXNQ9BS40 222 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 GBP3Q9H0R5 595 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 MINDY3Q9H8M7 445 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 AGPAT5Q9NUQ2 364 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 ORC3Q9UBD5 711 aaPredicted RBP21.52■■□□□ 1.04
COL27A1-205ENST00000485397 DNAJB4Q9UDY4 337 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 PCDHB2Q9Y5E7 798 aa21.52■■□□□ 1.04
COL27A1-205ENST00000485397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.51■■□□□ 1.03
COL27A1-205ENST00000485397 ZBTB39O15060 712 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 TBX3O15119 743 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 B4GALT3O60512 393 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 YWHABP31946 246 aaKnown RBP21.51■■□□□ 1.03
COL27A1-205ENST00000485397 SLC11A1P49279 550 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 RNASELQ05823 741 aaKnown RBP21.51■■□□□ 1.03
COL27A1-205ENST00000485397 SIGLEC14Q08ET2 396 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 CTTNQ14247 550 aaKnown RBP21.51■■□□□ 1.03
COL27A1-205ENST00000485397 BMS1Q14692 1282 aaKnown RBP21.51■■□□□ 1.03
COL27A1-205ENST00000485397 PTPN21Q16825 1174 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 IER5LQ5T953 404 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 AGMOQ6ZNB7 445 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 DDX53Q86TM3 631 aaKnown RBP21.51■■□□□ 1.03
COL27A1-205ENST00000485397 ZNF280BQ86YH2 543 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 C4orf19Q8IY42 314 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 C12orf76Q8N812 135 aaPredicted RBP21.51■■□□□ 1.03
COL27A1-205ENST00000485397 PSPC1Q8WXF1 523 aaKnown RBP21.51■■□□□ 1.03
COL27A1-205ENST00000485397 RSPH1Q8WYR4 309 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 PGBD4Q96DM1 585 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 ADAM7Q9H2U9 754 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 POMKQ9H5K3 350 aa21.51■■□□□ 1.03
COL27A1-205ENST00000485397 WEE2P0C1S8 567 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 CTSAP10619 480 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 RFC5P40937 340 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 MRE11P49959 708 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 AFF1P51825 1210 aaKnown RBP21.5■■□□□ 1.03
COL27A1-205ENST00000485397 CYP4A11Q02928 519 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 SPIRE1Q08AE8 756 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 LAMTOR4Q0VGL1 99 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 NR5A1Q13285 461 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 UBXN11Q5T124 520 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 CES5AQ6NT32 575 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 KANK3Q6NY19 840 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 SRGAP1Q7Z6B7 1085 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 NAP1L4Q99733 375 aaKnown RBP21.5■■□□□ 1.03
COL27A1-205ENST00000485397 VN1R3Q9BXE9 311 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 PPME1Q9Y570 386 aa21.5■■□□□ 1.03
COL27A1-205ENST00000485397 PIEZO1Q92508 2521 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 DDHD2O94830 711 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 FDPSP14324 419 aaKnown RBP21.49■■□□□ 1.03
COL27A1-205ENST00000485397 EPCAMP16422 314 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 HOXA11P31270 313 aaPredicted RBP21.49■■□□□ 1.03
COL27A1-205ENST00000485397 AK2P54819 239 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 ITIH3Q06033 890 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 EMC2Q15006 297 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 XKR9Q5GH70 373 aa21.49■■□□□ 1.03
COL27A1-205ENST00000485397 RARS2Q5T160 578 aaKnown RBP21.49■■□□□ 1.03
COL27A1-205ENST00000485397 MRPL10Q7Z7H8 261 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms