RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
SIK3-211ENST00000485363 EPHX3Q9H6B9 360 aa17.72■□□□□ 0.43
SIK3-211ENST00000485363 SH2B1Q9NRF2 756 aaPredicted RBP17.72■□□□□ 0.43
SIK3-211ENST00000485363 AGPAT5Q9NUQ2 364 aa17.72■□□□□ 0.43
SIK3-211ENST00000485363 FAM105AQ9NUU6 356 aa17.72■□□□□ 0.43
SIK3-211ENST00000485363 SPG21Q9NZD8 308 aa17.72■□□□□ 0.43
SIK3-211ENST00000485363 FSCN2O14926 492 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 MBTPS2O43462 519 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 ATP2B1P20020 1258 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 MCM7P33993 719 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 PBX3P40426 434 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 HMGN5P82970 282 aaKnown RBP17.71■□□□□ 0.43
SIK3-211ENST00000485363 SMAD4Q13485 552 aaKnown RBP17.71■□□□□ 0.43
SIK3-211ENST00000485363 FERMT3Q86UX7 667 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 RNF149Q8NC42 400 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 KHSRPQ92945 711 aaKnown RBP eCLIP17.71■□□□□ 0.433e-7■■■■□ 22.1
SIK3-211ENST00000485363 CCDC43Q96MW1 224 aaKnown RBP17.71■□□□□ 0.43
SIK3-211ENST00000485363 CDCA3Q99618 268 aaPredicted RBP17.71■□□□□ 0.43
SIK3-211ENST00000485363 ANKEF1Q9NU02 776 aa17.71■□□□□ 0.43
SIK3-211ENST00000485363 C5orf42Q9H799 3197 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 PER2O15055 1255 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 ZNF623O75123 536 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 COL9A1P20849 921 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 ALDH7A1P49419 539 aaKnown RBP17.7■□□□□ 0.42
SIK3-211ENST00000485363 ZP2Q05996 745 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 MXD4Q14582 209 aaPredicted RBP17.7■□□□□ 0.42
SIK3-211ENST00000485363 SMAD2Q15796 467 aaKnown RBP17.7■□□□□ 0.42
SIK3-211ENST00000485363 GLB1LQ6UWU2 654 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 ADHFE1Q8IWW8 467 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 LPPQ93052 612 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 PGBD4Q96DM1 585 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 MSLNLQ96KJ4 702 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 KIF2CQ99661 725 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 TCF25Q9BQ70 676 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 TMEM60Q9H2L4 133 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 FOXP1Q9H334 677 aaPredicted RBP17.7■□□□□ 0.42
SIK3-211ENST00000485363 ENTPD7Q9NQZ7 604 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 CLEC1BQ9P126 229 aa17.7■□□□□ 0.42
SIK3-211ENST00000485363 CARNS1A5YM72 827 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 POTEMA6NI47 508 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 PI4K2BG5E9Z4 385 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 DGAT1O75907 488 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 EYA4O95677 639 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 GLP2RO95838 553 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 BCAR1P56945 870 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 ORC2Q13416 577 aaPredicted RBP17.69■□□□□ 0.42
SIK3-211ENST00000485363 GNL2Q13823 731 aaKnown RBP17.69■□□□□ 0.42
SIK3-211ENST00000485363 TFDP1Q14186 410 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 DUSP6Q16828 381 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 LONRF3Q496Y0 759 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 PLPP4Q5VZY2 271 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 SLC39A11Q8N1S5 342 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 FBXO18Q8NFZ0 1043 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
SIK3-211ENST00000485363 MINDY3Q9H8M7 445 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 NGRNQ9NPE2 291 aaKnown RBP17.69■□□□□ 0.42
SIK3-211ENST00000485363 XPNPEP1Q9NQW7 623 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 PCDHB2Q9Y5E7 798 aa17.69■□□□□ 0.42
SIK3-211ENST00000485363 ERLIN2O94905 339 aa17.68■□□□□ 0.42
SIK3-211ENST00000485363 SRGAP2BP0DMP2 458 aa17.68■□□□□ 0.42
SIK3-211ENST00000485363 XRCC6P12956 609 aaKnown RBP eCLIP17.68■□□□□ 0.423e-6■■□□□ 14.4
SIK3-211ENST00000485363 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
SIK3-211ENST00000485363 RARRES1P49788 294 aa17.68■□□□□ 0.42
SIK3-211ENST00000485363 COASYQ13057 564 aa17.68■□□□□ 0.42
SIK3-211ENST00000485363 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
SIK3-211ENST00000485363 NOMO2Q5JPE7 1267 aa17.68■□□□□ 0.42
SIK3-211ENST00000485363 TMC7Q7Z402 723 aa17.68■□□□□ 0.42
SIK3-211ENST00000485363 BARX2Q9UMQ3 279 aaPredicted RBP17.68■□□□□ 0.42
SIK3-211ENST00000485363 INPP5FQ9Y2H2 1132 aa17.68■□□□□ 0.42
SIK3-211ENST00000485363 C19orf67A6NJJ6 358 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 ZC3H11AO75152 810 aaKnown RBP eCLIP17.67■□□□□ 0.42
SIK3-211ENST00000485363 OFD1O75665 1012 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 OR52Z1P0C646 297 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 HOXA11P31270 313 aaPredicted RBP17.67■□□□□ 0.42
SIK3-211ENST00000485363 PTENP60484 403 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 RNASELQ05823 741 aaKnown RBP17.67■□□□□ 0.42
SIK3-211ENST00000485363 POU5F1BQ06416 359 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 NCBP1Q09161 790 aaKnown RBP17.67■□□□□ 0.42
SIK3-211ENST00000485363 ZNF174Q15697 407 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 TMEM31Q5JXX7 168 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 SMRP1Q8NCR6 262 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 PIGOQ8TEQ8 1089 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 TMEM169Q96HH4 297 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 TUFT1Q9NNX1 390 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 TBC1D13Q9NVG8 400 aa17.67■□□□□ 0.42
SIK3-211ENST00000485363 MEIS3P2A8K0S8 358 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 HIDE1A8MVS5 230 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 NT5C1B-RDH14C9J2C7 533 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 INO80B-WBP1J3KQ70 363 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 SPATA31C1P0DKV0 1188 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 ALADP13716 330 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 AXLP30530 894 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 ARL2P36404 184 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 TECP42680 631 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 SMC1AQ14683 1233 aaKnown RBP17.66■□□□□ 0.42
SIK3-211ENST00000485363 BMS1Q14692 1282 aaKnown RBP17.66■□□□□ 0.42
SIK3-211ENST00000485363 TTC38Q5R3I4 469 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 UBXN11Q5T124 520 aa17.66■□□□□ 0.42
SIK3-211ENST00000485363 MRPL10Q7Z7H8 261 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms