RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SPIRE1Q08AE8 756 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 BMS1Q14692 1282 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 ERICH6BQ5W0A0 696 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 TWF2Q6IBS0 349 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 SYCE2Q6PIF2 218 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 TCP11Q8WWU5 503 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 CEP170P1Q96L14 293 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 MFSD14AQ96MC6 490 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 AGPAT5Q9NUQ2 364 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 PIN4Q9Y237 131 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 C2orf71A6NGG8 1288 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 OFD1O75665 1012 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 KRT2P35908 639 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 PBX3P40426 434 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 AK2P54819 239 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 RBM10P98175 930 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 GIT2Q14161 759 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 NOMO2Q5JPE7 1267 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 EARS2Q5JPH6 523 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 GLB1LQ6UWU2 654 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 DDX53Q86TM3 631 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
SCFD1-206ENST00000484733 LXNQ9BS40 222 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 ZSWIM4Q9H7M6 989 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 STK39Q9UEW8 545 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 IRAK3Q9Y616 596 aa12.82□□□□□ -0.36
SCFD1-206ENST00000484733 CLASP2O75122 1294 aaKnown RBP12.81□□□□□ -0.36
SCFD1-206ENST00000484733 LYPLA2O95372 231 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 YWHABP31946 246 aaKnown RBP12.81□□□□□ -0.36
SCFD1-206ENST00000484733 ZXDAP98168 799 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 PCBP1Q15365 356 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCFD1-206ENST00000484733 TPRNQ4KMQ1 711 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 PRPF31Q8WWY3 499 aaKnown RBP12.81□□□□□ -0.36
SCFD1-206ENST00000484733 NLRP4Q96MN2 994 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 ZBP1Q9H171 429 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 NRDE2Q9H7Z3 1164 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 BRMS1Q9HCU9 246 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 TBC1D13Q9NVG8 400 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 PPP4R2Q9NY27 417 aa12.81□□□□□ -0.36
SCFD1-206ENST00000484733 MARCH6O60337 910 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 GALTP07902 379 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 POU5F1BQ06416 359 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 LAMTOR4Q0VGL1 99 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 TRIM67Q6ZTA4 783 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 HFE2Q6ZVN8 426 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 TMEM169Q96HH4 297 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 IGSF21Q96ID5 467 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 DYDC2Q96IM9 177 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 ARID2Q68CP9 1835 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 CNTNAP2Q9UHC6 1331 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 CXCL14O95715 111 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 ITIH3Q06033 890 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 NCAPH2Q6IBW4 605 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
SCFD1-206ENST00000484733 CNNM3Q8NE01 707 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 LPPQ93052 612 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 RGL1Q9NZL6 768 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 KANSL3Q9P2N6 904 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 PCDHB2Q9Y5E7 798 aa12.8□□□□□ -0.36
SCFD1-206ENST00000484733 SLITRK3O94933 977 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 CTSAP10619 480 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 AXLP30530 894 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 HOXA11P31270 313 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-206ENST00000484733 EMC2Q15006 297 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 ME3Q16798 604 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 UBXN11Q5T124 520 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 AGMOQ6ZNB7 445 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 VPS52Q8N1B4 723 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 TMEM143Q96AN5 459 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 NECTIN4Q96NY8 510 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 ADAM7Q9H2U9 754 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 UBN1Q9NPG3 1134 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 ANKEF1Q9NU02 776 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 HCFC2Q9Y5Z7 792 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 TMEM221A6NGB7 291 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 NT5C1B-RDH14C9J2C7 533 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 M0R296 226 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 INPPL1O15357 1258 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 NCLP19338 710 aaKnown RBP12.79□□□□□ -0.36
SCFD1-206ENST00000484733 NR5A1Q13285 461 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 MXD4Q14582 209 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-206ENST00000484733 XKR9Q5GH70 373 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 LLGL2Q6P1M3 1020 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 NSUN7Q8NE18 718 aaKnown RBP12.79□□□□□ -0.36
SCFD1-206ENST00000484733 URGCPQ8TCY9 931 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 CCDC51Q96ER9 411 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 RPGRIP1Q96KN7 1286 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 MTRQ99707 1265 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 HSD17B14Q9BPX1 270 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 MINDY3Q9H8M7 445 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 DZANK1Q9NVP4 752 aa12.79□□□□□ -0.36
SCFD1-206ENST00000484733 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms