RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ELL2O00472 640 aaPredicted RBP6.55□□□□□ -1.36
SCAF11-207ENST00000484275 DAPK3O43293 454 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 CFBP00751 764 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 GAAP10253 952 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 TGM1P22735 817 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 NR4A1P22736 598 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 NANOS3P60323 173 aaKnown RBP6.55□□□□□ -1.36
SCAF11-207ENST00000484275 SMAD3P84022 425 aaKnown RBP6.55□□□□□ -1.36
SCAF11-207ENST00000484275 SPIDRQ14159 915 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 RABL3Q5HYI8 236 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 ZNF662Q6ZS27 426 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 MDGA1Q8NFP4 955 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 PRRX2Q99811 253 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 ORAI3Q9BRQ5 295 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 TTPALQ9BTX7 342 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 OSBPL6Q9BZF3 934 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 ING3Q9NXR8 418 aa6.55□□□□□ -1.36
SCAF11-207ENST00000484275 FOXN1O15353 648 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 FLT3P36888 993 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 PTTG1IPP53801 180 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 FAM214AQ32MH5 1076 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 MFSD5Q6N075 450 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 NXPE1Q8N323 547 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 PIK3C3Q8NEB9 887 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 PPP1R14CQ8TAE6 165 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 ARL8AQ96BM9 186 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 NOL10Q9BSC4 688 aaKnown RBP6.54□□□□□ -1.36
SCAF11-207ENST00000484275 ENKD1Q9H0I2 346 aa6.54□□□□□ -1.36
SCAF11-207ENST00000484275 ZNF891A8MT65 544 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-207ENST00000484275 MTSS1O43312 755 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 RAMP2O60895 175 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 NPEPPSP55786 919 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 DSG1Q02413 1049 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 NAIF1Q69YI7 327 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-207ENST00000484275 TIGD7Q6NT04 549 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-207ENST00000484275 RHOUQ7L0Q8 258 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 ZNF575Q86XF7 245 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 SLC25A43Q8WUT9 341 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-207ENST00000484275 SREK1Q8WXA9 508 aaKnown RBP6.53□□□□□ -1.36
SCAF11-207ENST00000484275 MRFAP1L1Q96HT8 127 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 MTFR1LQ9H019 292 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 ZSWIM4Q9H7M6 989 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCAF11-207ENST00000484275 MAGEC2Q9UBF1 373 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-207ENST00000484275 SYNPO2Q9UMS6 1093 aa6.53□□□□□ -1.36
SCAF11-207ENST00000484275 GOLGA6L6A8MZA4 724 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 TGM5O43548 720 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 KPNA6O60684 536 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 MFAP3LO75121 409 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 PCDH8O95206 1070 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 F2P00734 622 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 C21orf62-AS1Q17RA5 79 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 ZBTB41Q5SVQ8 909 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-207ENST00000484275 ZNF276Q8N554 614 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 CHTF18Q8WVB6 975 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 ST8SIA2Q92186 375 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 HAS1Q92839 578 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 ZNF496Q96IT1 587 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-207ENST00000484275 UIMC1Q96RL1 719 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 MLST8Q9BVC4 326 aa6.52□□□□□ -1.37
SCAF11-207ENST00000484275 LCHNA4D1U4 455 aa6.51□□□□□ -1.37
SCAF11-207ENST00000484275 IPO13O94829 963 aaKnown RBP6.51□□□□□ -1.37
SCAF11-207ENST00000484275 FSBPO95073 299 aa6.51□□□□□ -1.37
SCAF11-207ENST00000484275 HK1P19367 917 aa6.51□□□□□ -1.37
SCAF11-207ENST00000484275 ZFP36P26651 326 aaKnown RBP6.51□□□□□ -1.37
SCAF11-207ENST00000484275 CD69Q07108 199 aa6.51□□□□□ -1.37
SCAF11-207ENST00000484275 LAIR1Q6GTX8 287 aa6.51□□□□□ -1.37
SCAF11-207ENST00000484275 VRK3Q8IV63 474 aa6.51□□□□□ -1.37
SCAF11-207ENST00000484275 ZZZ3Q8IYH5 903 aa6.51□□□□□ -1.37
SCAF11-207ENST00000484275 FDXACB1Q9BRP7 624 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-207ENST00000484275 INTS7Q9NVH2 962 aaKnown RBP6.51□□□□□ -1.37
SCAF11-207ENST00000484275 CD2APQ9Y5K6 639 aa6.51□□□□□ -1.37
SCAF11-207ENST00000484275 MYPNQ86TC9 1320 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 HOXA3O43365 443 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-207ENST00000484275 PTGS2P35354 604 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 FSTL1Q12841 308 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 LRRC32Q14392 662 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 MBNL2Q5VZF2 373 aaKnown RBP6.5□□□□□ -1.37
SCAF11-207ENST00000484275 APBB1IPQ7Z5R6 666 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-207ENST00000484275 EFHBQ8N7U6 833 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 LENG9Q96B70 501 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 ZG16BQ96DA0 208 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 HIST1H2AHQ96KK5 128 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 HIST1H2AJQ99878 128 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 KRTAP9-8Q9BYQ0 159 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 CPEB1Q9BZB8 566 aaKnown RBP6.5□□□□□ -1.37
SCAF11-207ENST00000484275 MS4A5Q9H3V2 200 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 PIF1Q9H611 641 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 THG1LQ9NWX6 298 aaKnown RBP6.5□□□□□ -1.37
SCAF11-207ENST00000484275 ZKSCAN5Q9Y2L8 839 aa6.5□□□□□ -1.37
SCAF11-207ENST00000484275 ALDH1A2O94788 518 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 LY86O95711 162 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 PFKMP08237 780 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 GNAT2P19087 354 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 POU3F2P20265 443 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-207ENST00000484275 PROZP22891 400 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 CD40P25942 277 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 CASRP41180 1078 aa6.49□□□□□ -1.37
SCAF11-207ENST00000484275 MAN2A1Q16706 1144 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms