RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 FCRL3Q96P31 734 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-214ENST00000483925 TBCBQ99426 244 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 NUP62CLQ9H1M0 184 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 MYLK2Q9H1R3 596 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 RSAD1Q9HA92 442 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 TOPORSQ9NS56 1045 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-214ENST00000483925 USP40Q9NVE5 1235 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 SAGE1Q9NXZ1 904 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 CLIC5Q9NZA1 410 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 FNIP2Q9P278 1114 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 CNOT11Q9UKZ1 510 aaKnown RBP5.33□□□□□ -1.56
PTCD3-214ENST00000483925 PCDHGB3Q9Y5G1 929 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 NPFFR2Q9Y5X5 522 aa5.33□□□□□ -1.56
PTCD3-214ENST00000483925 ITIH6Q6UXX5 1313 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 A0A1B0GTL3 188 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 H3BML4 177 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 GOLIM4O00461 696 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 WNT9AO14904 365 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 FIBPO43427 364 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 VAMP4O75379 141 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 TUSC2O75896 110 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 RHOBTB3O94955 611 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
PTCD3-214ENST00000483925 DNM2P50570 870 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 PPFIA1Q13136 1202 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 TESK1Q15569 626 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 ZNF174Q15697 407 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 KIZQ2M2Z5 673 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 DGKKQ5KSL6 1271 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 NT5DC1Q5TFE4 455 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 E4F1Q66K89 784 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-214ENST00000483925 IQCEQ6IPM2 695 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 DENND5AQ6IQ26 1287 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 MZT2BQ6NZ67 158 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 CFAP161Q6P656 301 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 C16orf59Q7L2K0 433 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 PTRH1Q86Y79 214 aaKnown RBP5.32□□□□□ -1.56
PTCD3-214ENST00000483925 ANKRD18AQ8IVF6 992 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 GRAMD1CQ8IYS0 662 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 ADGRG2Q8IZP9 1017 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 KRT78Q8N1N4 520 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 ZNF610Q8N9Z0 462 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 NGDNQ8NEJ9 315 aaKnown RBP5.32□□□□□ -1.56
PTCD3-214ENST00000483925 JADE3Q92613 823 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 FBXW5Q969U6 566 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 TMEM169Q96HH4 297 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 PTCHD1Q96NR3 888 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 ACAP3Q96P50 834 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 SPATA25Q9BR10 227 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 GTPBP4Q9BZE4 634 aaKnown RBP5.32□□□□□ -1.56
PTCD3-214ENST00000483925 RASSF1Q9NS23 344 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 H2AFY2Q9P0M6 372 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-214ENST00000483925 HDAC9Q9UKV0 1011 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 NOL7Q9UMY1 257 aaKnown RBP5.32□□□□□ -1.56
PTCD3-214ENST00000483925 SPO11Q9Y5K1 396 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 LRRFIP2Q9Y608 721 aaKnown RBP5.32□□□□□ -1.56
PTCD3-214ENST00000483925 SLC4A7Q9Y6M7 1214 aa5.32□□□□□ -1.56
PTCD3-214ENST00000483925 CCDC66A2RUB6 948 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 SH3D21A4FU49 640 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 FAM47E-STBD1D6RA91 191 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 J3KRW8 73 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 TGM5O43548 720 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 MGEA5O60502 916 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 SNX2O60749 519 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 MYBP10242 640 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 VDRP11473 427 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 TACR1P25103 407 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 CCDC96Q2M329 555 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 DPY19L1Q2PZI1 675 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 INTS11Q5TA45 600 aaKnown RBP5.31□□□□□ -1.56
PTCD3-214ENST00000483925 OTOP1Q7RTM1 612 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 OVCH2Q7RTZ1 564 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 DENND1CQ8IV53 801 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 OR2C3Q8N628 320 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 GIMAP8Q8ND71 665 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-214ENST00000483925 COPS5Q92905 334 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 RIPOR3Q96MK2 946 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 BOCQ9BWV1 1114 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 ZDHHC5Q9C0B5 715 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 RSPH9Q9H1X1 276 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-214ENST00000483925 TOMM22Q9NS69 142 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 CCM2LQ9NUG4 571 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-214ENST00000483925 PLA2G2DQ9UNK4 145 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 PCDHGB6Q9Y5F9 930 aa5.31□□□□□ -1.56
PTCD3-214ENST00000483925 A0A1B0GVC2 190 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 PRSS47A8MTI9 375 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 K7ESM1 405 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 DTNBO60941 627 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 THBDP07204 575 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 CD3EP07766 207 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 INSRRP14616 1297 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 CYP4F3Q08477 520 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 KCNAB2Q13303 367 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 CRY1Q16526 586 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 TUBB8Q3ZCM7 444 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 RNF220Q5VTB9 566 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 CREB3L3Q68CJ9 461 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 HHIPL2Q6UWX4 724 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 FRMD7Q6ZUT3 714 aa5.3□□□□□ -1.56
PTCD3-214ENST00000483925 OTOP3Q7RTS5 596 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms