RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 NRDE2Q9H7Z3 1164 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 DDX20Q9UHI6 824 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 AMACRQ9UHK6 382 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 HPS5Q9UPZ3 1129 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 HBS1LQ9Y450 684 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 ABCC12Q96J65 1359 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 TMEM120BA0PK00 339 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 PRDM1O75626 825 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 CDH3P22223 829 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 PDIA3P30101 505 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 GNL1P36915 607 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 PIK3CAP42336 1068 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 RGS21Q2M5E4 152 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 CWF19L1Q69YN2 538 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 RTL3Q8N8U3 475 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 BHMT2Q9H2M3 363 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 DMAP1Q9NPF5 467 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 PTK2Q05397 1052 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 RESTQ13127 1097 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 RNF19BQ6ZMZ0 732 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 STX19Q8N4C7 294 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 AGR3Q8TD06 166 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 ARMT1Q9H993 441 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 SAP30BPQ9UHR5 308 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 CBFA2T3O75081 653 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 KRT24Q2M2I5 525 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 FAF2Q96CS3 445 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 DCUN1D5Q9BTE7 237 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 C20orf96Q9NUD7 363 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 SCN3BQ9NY72 215 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 A0A0D9SFI3 127 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 TCN1P20061 433 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 POLR2BP30876 1174 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 CCDC137Q6PK04 289 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 PNKPQ96T60 521 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 MFAP3P55082 362 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 THOC7Q6I9Y2 204 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 TPH2Q8IWU9 490 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 RIMS2Q9UQ26 1411 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 ZSCAN9O15535 394 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 OR52Z1P0C646 297 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 CHRNA3P32297 505 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 ITGADQ13349 1161 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 DHX34Q14147 1143 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 P3H1Q32P28 736 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 KLHL17Q6TDP4 642 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 CCDC117Q8IWD4 279 aaPredicted RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 TSPAN18Q96SJ8 248 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 UBE2OQ9C0C9 1292 aaKnown RBP10.87□□□□□ -0.67
COL12A1-207ENST00000483888 DISC1Q9NRI5 854 aa10.87□□□□□ -0.67
COL12A1-207ENST00000483888 DDX39AO00148 427 aaKnown RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 UBASH3BQ8TF42 649 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 ATP8B4Q8TF62 1192 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 PDZK1P1A8MUH7 402 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 ATP6V1G1O75348 118 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 PRLP01236 227 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 DLATP10515 647 aaKnown RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 P4HA1P13674 534 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 PAX3P23760 479 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 ADD1P35611 737 aaKnown RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 RGS2P41220 211 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 CPA2P48052 419 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 TTC7AQ9ULT0 858 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 ABCC5O15440 1437 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 PIK3R2O00459 728 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 PUDPQ08623 228 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 ALKBH5Q6P6C2 394 aaKnown RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 LVRNQ6Q4G3 990 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 CLEC4GQ6UXB4 293 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 COPS6Q7L5N1 327 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 WAPLQ7Z5K2 1190 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 BLIDQ8IZY5 108 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 NDST4Q9H3R1 872 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 CCDC189A1A4V9 331 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 AIM2O14862 343 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 ALBP02768 609 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 TRAPPC10P48553 1259 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 BRIP1Q9BX63 1249 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 CEP44Q9C0F1 390 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 PCDHB4Q9Y5E5 795 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 KLHL2O95198 593 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 JAK1P23458 1154 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 TUBA4AP68366 448 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 TUBA3CQ13748 450 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 MYBPC2Q14324 1141 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 SCUBE1Q8IWY4 988 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 TELO2Q9Y4R8 837 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 SLC9A1P19634 815 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 TMOD4Q9NZQ9 345 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 CALN1Q9BXU9 219 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 GOLPH3LQ9H4A5 285 aa10.86□□□□□ -0.67
COL12A1-207ENST00000483888 MRPL47Q9HD33 250 aaKnown RBP10.86□□□□□ -0.67
COL12A1-207ENST00000483888 EMC3Q9P0I2 261 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms