RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 SYDE2Q5VT97 1194 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 STRA8Q7Z7C7 330 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 DTX3Q8N9I9 347 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 ERCC4Q92889 916 aaPredicted RBP3.9□□□□□ -1.79
PKP4-212ENST00000483881 LPPQ93052 612 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 FERMT2Q96AC1 680 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 HIST1H2AHQ96KK5 128 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 HIST1H2AJQ99878 128 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 L2HGDHQ9H9P8 463 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 KCMF1Q9P0J7 381 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 MSRAQ9UJ68 235 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 ZBTB21Q9ULJ3 1066 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 TCAF1Q9Y4C2 921 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 LAS1LQ9Y4W2 734 aaKnown RBP3.9□□□□□ -1.79
PKP4-212ENST00000483881 NUMBLQ9Y6R0 609 aa3.9□□□□□ -1.79
PKP4-212ENST00000483881 SHTN1A0MZ66 631 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 MROH6A6NGR9 719 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 H0Y858 1186 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 KCNK3O14649 394 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 CLGNO14967 610 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 H2AFYO75367 372 aaKnown RBP3.89□□□□□ -1.79
PKP4-212ENST00000483881 PRPF6O94906 941 aaKnown RBP3.89□□□□□ -1.79
PKP4-212ENST00000483881 FBLP22087 321 aaKnown RBP3.89□□□□□ -1.79
PKP4-212ENST00000483881 RPL13P26373 211 aaKnown RBP3.89□□□□□ -1.79
PKP4-212ENST00000483881 MCM7P33993 719 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 STAT5AP42229 794 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 SLC5A3P53794 718 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 EPHB1P54762 984 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 NRG3P56975 720 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 KLF1Q13351 362 aaPredicted RBP3.89□□□□□ -1.79
PKP4-212ENST00000483881 UGT8Q16880 541 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 WDR72Q3MJ13 1102 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 CATSPEREQ5SY80 951 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 SLFN12LQ6IEE8 588 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 KIAA1841Q6NSI8 718 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 BORAQ6PGQ7 559 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 LDLRAD3Q86YD5 345 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 RBM12BQ8IXT5 1001 aaKnown RBP3.89□□□□□ -1.79
PKP4-212ENST00000483881 GFM2Q969S9 779 aaKnown RBP3.89□□□□□ -1.79
PKP4-212ENST00000483881 ZBTB8AQ96BR9 441 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 GPATCH3Q96I76 525 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 OR10A5Q9H207 317 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 SEMA4AQ9H3S1 761 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 BARX1Q9HBU1 254 aaPredicted RBP3.89□□□□□ -1.79
PKP4-212ENST00000483881 UCKL1Q9NWZ5 548 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 PRDM4Q9UKN5 801 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 VWA7Q9Y334 891 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 TELO2Q9Y4R8 837 aa3.89□□□□□ -1.79
PKP4-212ENST00000483881 KLHL33A6NCF5 533 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 C9orf118A6NHY6 69 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 DVL2O14641 736 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 TGM5O43548 720 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 KDM1AO60341 852 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 FSBPO95073 299 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 S100BP04271 92 aaPredicted RBP3.88□□□□□ -1.79
PKP4-212ENST00000483881 RPLP2P05387 115 aaKnown RBP3.88□□□□□ -1.79
PKP4-212ENST00000483881 C8BP07358 591 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 MMEP08473 750 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 IL13P35225 146 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 ITGA1P56199 1179 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 MRPS9P82933 396 aaKnown RBP3.88□□□□□ -1.79
PKP4-212ENST00000483881 SLC6A3Q01959 620 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 STILQ15468 1287 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 SURF1Q15526 300 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 FSCN1Q16658 493 aaKnown RBP3.88□□□□□ -1.79
PKP4-212ENST00000483881 DGKDQ16760 1214 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 ANO4Q32M45 955 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 ZNF568Q3ZCX4 644 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 FAM26FQ5R3K3 315 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 PRAMEF9Q5VWM5 478 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 SPTY2D1Q68D10 685 aaPredicted RBP3.88□□□□□ -1.79
PKP4-212ENST00000483881 GRAMD4Q6IC98 578 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 BMP8AQ7Z5Y6 402 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 CIR1Q86X95 450 aaPredicted RBP3.88□□□□□ -1.79
PKP4-212ENST00000483881 REXO1L1PQ8IX06 675 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 NME8Q8N427 588 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 CNTD1Q8N815 330 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.88□□□□□ -1.79
PKP4-212ENST00000483881 NEU4Q8WWR8 484 aaPredicted RBP3.88□□□□□ -1.79
PKP4-212ENST00000483881 ZNF622Q969S3 477 aaKnown RBP eCLIP3.88□□□□□ -1.793e-8■■□□□ 11.7
PKP4-212ENST00000483881 TMEM168Q9H0V1 697 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 MSL2Q9HCI7 577 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 BTBD7Q9P203 1132 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 SAE1Q9UBE0 346 aaPredicted RBP3.88□□□□□ -1.79
PKP4-212ENST00000483881 CROTQ9UKG9 612 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 MYPNQ86TC9 1320 aa3.88□□□□□ -1.79
PKP4-212ENST00000483881 A0A0G2JNJ9 132 aa3.87□□□□□ -1.79
PKP4-212ENST00000483881 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.87□□□□□ -1.79
PKP4-212ENST00000483881 PATE3B3GLJ2 98 aa3.87□□□□□ -1.79
PKP4-212ENST00000483881 SNUPNO95149 360 aaKnown RBP3.87□□□□□ -1.79
PKP4-212ENST00000483881 APOL3O95236 402 aa3.87□□□□□ -1.79
PKP4-212ENST00000483881 PRLP01236 227 aa3.87□□□□□ -1.79
PKP4-212ENST00000483881 CYP1A1P04798 512 aaPredicted RBP3.87□□□□□ -1.79
PKP4-212ENST00000483881 POU3F3P20264 500 aaPredicted RBP3.87□□□□□ -1.79
PKP4-212ENST00000483881 PTX3P26022 381 aaPredicted RBP3.87□□□□□ -1.79
PKP4-212ENST00000483881 POLD1P28340 1107 aa3.87□□□□□ -1.79
PKP4-212ENST00000483881 MEOX1P50221 254 aa3.87□□□□□ -1.79
PKP4-212ENST00000483881 OS9Q13438 667 aaPredicted RBP3.87□□□□□ -1.79
PKP4-212ENST00000483881 SPIDRQ14159 915 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms