RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 COPS5Q92905 334 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 ACCSQ96QU6 501 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 MAP7D2Q96T17 732 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 TIPINQ9BVW5 301 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 EDEM3Q9BZQ6 932 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 TMEM206Q9H813 350 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 RNF216Q9NWF9 866 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 HSPBP1Q9NZL4 362 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 FRMD4BQ9Y2L6 1034 aa9.66□□□□□ -0.86
CDC42SE1-204ENST00000483763 HTTP42858 3142 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 OATP04181 439 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 TGFB3P10600 412 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 CETPP11597 493 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 TCF7P36402 384 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 GTF2A2P52657 109 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 PPP3CAQ08209 521 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 BFSP1Q12934 665 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 DRP2Q13474 957 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 METTL7BQ6UX53 244 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 TMEM174Q8WUU8 243 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 PLCB1Q9NQ66 1216 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 KMT5AQ9NQR1 393 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 MCM3APO60318 1980 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 CASP8AP2Q9UKL3 1982 aa9.65□□□□□ -0.86
CDC42SE1-204ENST00000483763 TRPA1O75762 1119 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 SLU7O95391 586 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 LCA5LO95447 670 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 CYLC1P35663 651 aaPredicted RBP9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 PPP2R3AQ06190 1150 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 RAPGEF1Q13905 1077 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 CCDC122Q5T0U0 273 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 GJC2Q5T442 439 aaPredicted RBP9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 SFMBT2Q5VUG0 894 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 GBP6Q6ZN66 633 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 IRF2BP2Q7Z5L9 587 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 CBWD2Q8IUF1 395 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 MAP4K3Q8IVH8 894 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 GOLGA5Q8TBA6 731 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 KIFAP3Q92845 792 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 SAAL1Q96ER3 474 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 POLR3FQ9H1D9 316 aaPredicted RBP9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 MROH8Q9H579 483 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 DHX33Q9H6R0 707 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 ATP6V0A4Q9HBG4 840 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 AIPL1Q9NZN9 384 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 SALL4Q9UJQ4 1053 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 PNMA3Q9UL41 463 aa9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 MYH9P35579 1960 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-204ENST00000483763 AKR1B10O60218 316 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 ADRB2P07550 413 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 MARK3P27448 753 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 STAT5BP51692 787 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 LBX1P52954 281 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 SMTNP53814 917 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 KRT83P78385 493 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 ALCAMQ13740 583 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 NEDD9Q14511 834 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 EMC2Q15006 297 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 TARBP2Q15633 366 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 SPRYD7Q5W111 196 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 CCDC62Q6P9F0 684 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 DNAAF5Q86Y56 855 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 C12orf56Q8IXR9 622 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 GPRC5AQ8NFJ5 357 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 LMO3Q8TAP4 145 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 ASAP3Q8TDY4 903 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 SYN2Q92777 582 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 FAM84AQ96KN4 292 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 GPR20Q99678 358 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 IFIH1Q9BYX4 1025 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 HAUS4Q9H6D7 363 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 MLXIPQ9HAP2 919 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 ARHGAP28Q9P2N2 729 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 ADAMTS1Q9UHI8 967 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 PCDHA13Q9Y5I0 950 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 MRFAP1Q9Y605 127 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 A0A087X0T9 212 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 MACROD2A1Z1Q3 448 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 GTPBP10A4D1E9 387 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 ENC1O14682 589 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 DKC1O60832 514 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 FAM228BP0C875 321 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 GLRA2P23416 452 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 GCLMP48507 274 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 POLGP54098 1239 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 PTK2Q05397 1052 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 MYBPC2Q14324 1141 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 ERCC6LQ2NKX8 1250 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 TDRD12Q587J7 1177 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 CELF3Q5SZQ8 465 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 IQCEQ6IPM2 695 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 KIAA1328Q86T90 577 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 XXYLT1Q8NBI6 393 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 MCPH1Q8NEM0 835 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 SEPT1Q8WYJ6 367 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 JAKMIP2Q96AA8 810 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 ZBTB10Q96DT7 871 aa9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 POP1Q99575 1024 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-204ENST00000483763 CARD6Q9BX69 1037 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms