RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TSPAN1O60635 241 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 ZNF623O75123 536 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 F13A1P00488 732 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 SKIP12755 728 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 AXLP30530 894 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 UBA7P41226 1012 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 NAMPTP43490 491 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 GATMP50440 423 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 TWF2Q6IBS0 349 aaKnown RBP19.94■□□□□ 0.78
HDAC6-225ENST00000483506 RINT1Q6NUQ1 792 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 MAEAQ7L5Y9 396 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 SYT2Q8N9I0 419 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-225ENST00000483506 FBXO22Q8NEZ5 403 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 MAFAQ8NHW3 353 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-225ENST00000483506 RSPH1Q8WYR4 309 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 CCDC51Q96ER9 411 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 RUSC1Q9BVN2 902 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 TIPINQ9BVW5 301 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 TMEM117Q9H0C3 514 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 LMCD1Q9NZU5 365 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 KCND2Q9NZV8 630 aa19.94■□□□□ 0.78
HDAC6-225ENST00000483506 MRPL42Q9Y6G3 142 aaKnown RBP19.94■□□□□ 0.78
HDAC6-225ENST00000483506 PRRC2BQ5JSZ5 2229 aaKnown RBP19.93■□□□□ 0.78
HDAC6-225ENST00000483506 INO80B-WBP1J3KQ70 363 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 RB1P06400 928 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 GUCY2CP25092 1073 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 MARCKSP29966 332 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-225ENST00000483506 BMPR1AP36894 532 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 SLC12A3P55017 1021 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 PPP2R5AQ15172 486 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 FAM187BQ17R55 369 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 PPP4R3CPQ6ZMV5 832 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 DAW1Q8N136 415 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 CALML4Q96GE6 196 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 CDK5RAP3Q96JB5 506 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 PRIMPOLQ96LW4 560 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 CSRNP2Q9H175 543 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 C2orf40Q9H1Z8 148 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 FAM105AQ9NUU6 356 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 MTUS1Q9ULD2 1270 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 MTCH2Q9Y6C9 303 aa19.93■□□□□ 0.78
HDAC6-225ENST00000483506 PRUNE2Q8WUY3 3088 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 LRRIQ4A6NIV6 560 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 H3BNC9 293 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 ERLIN2O94905 339 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 FGFR1P11362 822 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 MAPK7Q13164 816 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 PKP1Q13835 747 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 ZRSR1Q15695 479 aaKnown RBP19.92■□□□□ 0.78
HDAC6-225ENST00000483506 UBXN11Q5T124 520 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 LINC00301Q8NCQ3 95 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 LRRC15Q8TF66 581 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 GDPD5Q8WTR4 605 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 ZNF396Q96N95 335 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-225ENST00000483506 CASD1Q96PB1 797 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 PLVAPQ9BX97 442 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 FZD8Q9H461 694 aa19.92■□□□□ 0.78
HDAC6-225ENST00000483506 PRMT7Q9NVM4 692 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-225ENST00000483506 TBKBP1A7MCY6 615 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 PLA2G4BP0C869 781 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 CEBPZQ03701 1054 aaKnown RBP19.91■□□□□ 0.78
HDAC6-225ENST00000483506 PAN2Q504Q3 1202 aaKnown RBP19.91■□□□□ 0.78
HDAC6-225ENST00000483506 CLLU1OSQ5K130 101 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 NOTUMQ6P988 496 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 MRPL10Q7Z7H8 261 aaKnown RBP19.91■□□□□ 0.78
HDAC6-225ENST00000483506 ZBTB8OSQ8IWT0 167 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 KRI1Q8N9T8 703 aaKnown RBP19.91■□□□□ 0.78
HDAC6-225ENST00000483506 SPRYD3Q8NCJ5 442 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 IFT74Q96LB3 600 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 DRC1Q96MC2 740 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 CCDC113Q9H0I3 377 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 C17orf75Q9HAS0 396 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 BLOC1S4Q9NUP1 217 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 REV3LO60673 3130 aa19.91■□□□□ 0.78
HDAC6-225ENST00000483506 GTPBP6O43824 516 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-225ENST00000483506 HIP1RO75146 1068 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 YEATS4O95619 227 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 ARF4P18085 180 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-225ENST00000483506 PLCG1P19174 1290 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 IBSPP21815 317 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-225ENST00000483506 IGFBP4P22692 258 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 CTNNB1P35222 781 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 NCBP1Q09161 790 aaKnown RBP19.9■□□□□ 0.78
HDAC6-225ENST00000483506 KARSQ15046 597 aaKnown RBP19.9■□□□□ 0.78
HDAC6-225ENST00000483506 NAALADL2Q58DX5 795 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 ATL3Q6DD88 541 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 USP49Q70CQ1 688 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 P2RX5Q93086 422 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 EPSTI1Q96J88 318 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 PLIN2Q99541 437 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 C11orf84Q9BUA3 381 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-225ENST00000483506 DAXXQ9UER7 740 aaPredicted RBP19.9■□□□□ 0.78
HDAC6-225ENST00000483506 PCDHB2Q9Y5E7 798 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 CNTNAP2Q9UHC6 1331 aa19.9■□□□□ 0.78
HDAC6-225ENST00000483506 A0A1B0GUA9 196 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 PPP6R2O75170 966 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 BRD1O95696 1058 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 EFNA5P52803 228 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 LRRC43Q8N309 656 aa19.89■□□□□ 0.77
HDAC6-225ENST00000483506 CNNM3Q8NE01 707 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms