RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 FAM43BQ6ZT52 329 aaPredicted RBP15.62■□□□□ 0.09
VARS-226ENST00000483275 CATSPER4Q7RTX7 472 aa15.62■□□□□ 0.09
VARS-226ENST00000483275 TRIM22Q8IYM9 498 aa15.62■□□□□ 0.09
VARS-226ENST00000483275 BLIDQ8IZY5 108 aa15.62■□□□□ 0.09
VARS-226ENST00000483275 NIFKQ9BYG3 293 aaKnown RBP15.62■□□□□ 0.09
VARS-226ENST00000483275 ADAM7Q9H2U9 754 aa15.62■□□□□ 0.09
VARS-226ENST00000483275 NRDE2Q9H7Z3 1164 aa15.62■□□□□ 0.09
VARS-226ENST00000483275 SH3GLB2Q9NR46 395 aa15.62■□□□□ 0.09
VARS-226ENST00000483275 GJB4Q9NTQ9 266 aa15.62■□□□□ 0.09
VARS-226ENST00000483275 WRAP73Q9P2S5 460 aaPredicted RBP15.62■□□□□ 0.09
VARS-226ENST00000483275 DDX25Q9UHL0 483 aaKnown RBP15.62■□□□□ 0.09
VARS-226ENST00000483275 IGKV6-21A0A0C4DH24 114 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 AVPR2P30518 371 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 RNASELQ05823 741 aaKnown RBP15.61■□□□□ 0.09
VARS-226ENST00000483275 NOMO2Q5JPE7 1267 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 CES5AQ6NT32 575 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 GLB1LQ6UWU2 654 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 TMC5Q6UXY8 1006 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 ZNF280BQ86YH2 543 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 FBXL16Q8N461 479 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 TMEM143Q96AN5 459 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 IGSF21Q96ID5 467 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 FAM105AQ9NUU6 356 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 NR2E1Q9Y466 385 aa15.61■□□□□ 0.09
VARS-226ENST00000483275 TDRD15B5MCY1 1934 aaKnown RBP15.6■□□□□ 0.09
VARS-226ENST00000483275 CYP3A7-CYP3A51PA0A087WV96 503 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 H0Y858 1186 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 CPLX1O14810 134 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 MAFO75444 373 aaPredicted RBP15.6■□□□□ 0.09
VARS-226ENST00000483275 OFD1O75665 1012 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 MYBP10242 640 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 CYP3A7P24462 503 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 PSMA5P28066 241 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 DNM2P50570 870 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 EVCP57679 992 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 MTMR3Q13615 1198 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 NONOQ15233 471 aaKnown RBP eCLIP15.6■□□□□ 0.09
VARS-226ENST00000483275 LETM2Q2VYF4 491 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 RUFY3Q7L099 469 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 TDRD5Q8NAT2 981 aaKnown RBP15.6■□□□□ 0.09
VARS-226ENST00000483275 TMEM87AQ8NBN3 555 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 RDM1Q8NG50 284 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 MINDY3Q9H8M7 445 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 VAV3Q9UKW4 847 aa15.6■□□□□ 0.09
VARS-226ENST00000483275 FAM205CA6NFA0 338 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 GALTP07902 379 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 SRGAP2CP0DJJ0 459 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 ITIH3Q06033 890 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 PTPN14Q15678 1187 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 ZNF410Q86VK4 478 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 ZNF710Q8N1W2 664 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 DAGLBQ8NCG7 672 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 SLC22A17Q8WUG5 538 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 RIPOR3Q96MK2 946 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 MBOAT7Q96N66 472 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 SLKQ9H2G2 1235 aaPredicted RBP15.59■□□□□ 0.09
VARS-226ENST00000483275 IFT122Q9HBG6 1241 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 ZSWIM6Q9HCJ5 1215 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 CYP26B1Q9NR63 512 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 CHST12Q9NRB3 414 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 AGPAT5Q9NUQ2 364 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 LIMD1Q9UGP4 676 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 DBR1Q9UK59 544 aaKnown RBP15.59■□□□□ 0.09
VARS-226ENST00000483275 SORCS3Q9UPU3 1222 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 PCDHB2Q9Y5E7 798 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
VARS-226ENST00000483275 RIF1Q5UIP0 2472 aaKnown RBP15.59■□□□□ 0.09
VARS-226ENST00000483275 SPDYE4A6NLX3 237 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 C2CD2LO14523 706 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 DDHD2O94830 711 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 REC8O95072 547 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 DEXIO95424 95 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 CTSAP10619 480 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 MTHFRP42898 656 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 PSMC5P62195 406 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 KIAA1841Q6NSI8 718 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 AGMOQ6ZNB7 445 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 DDX53Q86TM3 631 aaKnown RBP15.58■□□□□ 0.08
VARS-226ENST00000483275 CABP7Q86V35 215 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 TMEM105Q8N8V8 129 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 OXER1Q8TDS5 423 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 PRPF31Q8WWY3 499 aaKnown RBP15.58■□□□□ 0.08
VARS-226ENST00000483275 ATOH1Q92858 354 aaPredicted RBP15.58■□□□□ 0.08
VARS-226ENST00000483275 NECTIN4Q96NY8 510 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 CYP46A1Q9Y6A2 500 aa15.58■□□□□ 0.08
VARS-226ENST00000483275 F8W810 466 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 ZBTB39O15060 712 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 GFRA3O60609 400 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 POMCP01189 267 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 POLGP54098 1239 aaPredicted RBP15.57■□□□□ 0.08
VARS-226ENST00000483275 CYP4A11Q02928 519 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 UBXN11Q5T124 520 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 KRT25Q7Z3Z0 450 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 CEP170P1Q96L14 293 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 LXNQ9BS40 222 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 TRAIPQ9BWF2 469 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 DZANK1Q9NVP4 752 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 RGL1Q9NZL6 768 aa15.57■□□□□ 0.08
VARS-226ENST00000483275 PRG3Q9Y2Y8 225 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms