RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 POU5F1BQ06416 359 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 DHX8Q14562 1220 aaKnown RBP9.71□□□□□ -0.86
SNX4-205ENST00000482965 PPP2R5AQ15172 486 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 TWF2Q6IBS0 349 aaKnown RBP9.71□□□□□ -0.86
SNX4-205ENST00000482965 C1orf186Q6ZWK4 172 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 USP49Q70CQ1 688 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 ZBTB8OSQ8IWT0 167 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 SYT2Q8N9I0 419 aaPredicted RBP9.71□□□□□ -0.86
SNX4-205ENST00000482965 DEPTORQ8TB45 409 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 KCNG4Q8TDN1 519 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 BSNDQ8WZ55 320 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 FAM212AQ96EL1 285 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 TIPINQ9BVW5 301 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 MINDY3Q9H8M7 445 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 POLD4Q9HCU8 107 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 CHST12Q9NRB3 414 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 MTMR10Q9NXD2 777 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 DACT1Q9NYF0 836 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 ATP6V1DQ9Y5K8 247 aa9.71□□□□□ -0.86
SNX4-205ENST00000482965 RALGAPA2Q2PPJ7 1873 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 CUTAO60888 179 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 HIP1RO75146 1068 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 GUCY2CP25092 1073 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 ANP32AP39687 249 aaKnown RBP9.7□□□□□ -0.86
SNX4-205ENST00000482965 NAMPTP43490 491 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 SLC12A3P55017 1021 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 KRT85P78386 507 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 NUCB2P80303 420 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 TAP1Q03518 808 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 MBTD1Q05BQ5 628 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 NCBP1Q09161 790 aaKnown RBP9.7□□□□□ -0.86
SNX4-205ENST00000482965 RAD51AP2Q09MP3 1159 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 MCM6Q14566 821 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 PCBP1Q15365 356 aaKnown RBP eCLIP9.7□□□□□ -0.86
SNX4-205ENST00000482965 RRAGBQ5VZM2 374 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 GPBP1Q86WP2 473 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 RNF169Q8NCN4 708 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 LARP4BQ92615 738 aaKnown RBP9.7□□□□□ -0.86
SNX4-205ENST00000482965 RAD54LQ92698 747 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 DRC1Q96MC2 740 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 NFKBIZQ9BYH8 718 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 C2orf40Q9H1Z8 148 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 CERS4Q9HA82 394 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 BLOC1S4Q9NUP1 217 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 AGPAT5Q9NUQ2 364 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 TMEM161AQ9NX61 479 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 KCND2Q9NZV8 630 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 STK17AQ9UEE5 414 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 ADGRA3Q8IWK6 1321 aa9.7□□□□□ -0.86
SNX4-205ENST00000482965 LINC01553A4QN01 128 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 CCDC169A6NNP5 214 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 TSPAN1O60635 241 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 DGKIO75912 1065 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 KRT18P05783 430 aaKnown RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 SKIP12755 728 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 LIG1P18858 919 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 AXLP30530 894 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 STAT6P42226 847 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 ME1P48163 572 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 GATMP50440 423 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 RAB27AP51159 221 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 PEX3P56589 373 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 FAM189BP81408 668 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 DMP1Q13316 513 aaPredicted RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 COL4A6Q14031 1691 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 BTG3Q14201 252 aaPredicted RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 GRIN2CQ14957 1233 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 LAMA3Q16787 3333 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 TMEM132AQ24JP5 1023 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 PAN2Q504Q3 1202 aaKnown RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 CDCA2Q69YH5 1023 aaPredicted RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 CCDC73Q6ZRK6 1079 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 ECHDC2Q86YB7 292 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 DAW1Q8N136 415 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 FIBCD1Q8N539 461 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 SP7Q8TDD2 431 aaPredicted RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 LRRC15Q8TF66 581 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 ARNTL2Q8WYA1 636 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 GUCD1Q96NT3 240 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 TGS1Q96RS0 853 aaKnown RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 KIFC3Q9BVG8 833 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 KIAA1671Q9BY89 1806 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 PANK2Q9BZ23 570 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 PRDM12Q9H4Q4 367 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 ELAC1Q9H777 363 aaKnown RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 PRMT7Q9NVM4 692 aaPredicted RBP9.69□□□□□ -0.86
SNX4-205ENST00000482965 RCOR1Q9UKL0 485 aa9.69□□□□□ -0.86
SNX4-205ENST00000482965 NPHP3-ACAD11A0A0J9YXS1 232 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 A0A0U1RQF3 1178 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 TBKBP1A7MCY6 615 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 SFI1A8K8P3 1242 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 HOXA2O43364 376 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 FAM13AO94988 1023 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 PRKCBP05771 671 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 FGFR1P11362 822 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 HOXA11P31270 313 aaPredicted RBP9.68□□□□□ -0.86
SNX4-205ENST00000482965 DDIT3P35638 169 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 NPTX2P47972 431 aa9.68□□□□□ -0.86
SNX4-205ENST00000482965 EFNA5P52803 228 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms