RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 NR3C1P04150 777 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 GHRP10912 638 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 ATP4AP20648 1035 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 KCNJ2P63252 427 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 ERICH1Q86X53 443 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 SLFN12Q8IYM2 578 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 DNM3Q9UQ16 869 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 PPIP5K2O43314 1243 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 GFPT2O94808 682 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 POLE2P56282 527 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 LACTBP83111 547 aaPredicted RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 ARHGAP4P98171 946 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 BYSLQ13895 437 aaKnown RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 VPS72Q15906 364 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 USH1GQ495M9 461 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 CRY2Q49AN0 593 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 OSGEPQ9NPF4 335 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 SUCLA2Q9P2R7 463 aaPredicted RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 NR2E1Q9Y466 385 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 PCDHB13Q9Y5F0 798 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 CCDC188H7C350 402 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 CALUO43852 315 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-213ENST00000482878 LINGO3P0C6S8 592 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 POLD1P28340 1107 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 IFNAR2P48551 515 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 CERS5Q8N5B7 392 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 OLIG1Q8TAK6 271 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 CRYGNQ8WXF5 182 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 KLHL29Q96CT2 875 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 TRIM4Q9C037 500 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 GOLGA6L10A0A0M3HER8 536 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 FERP16591 822 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 RPA1P27694 616 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 GALCP54803 685 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 ATP11AP98196 1134 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 TMC3Q7Z5M5 1100 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 LNX1Q8TBB1 728 aaPredicted RBP13.39□□□□□ -0.27
CCDC78-213ENST00000482878 TEKT4Q8WW24 435 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 LENG9Q96B70 501 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 BORCS6Q96GS4 357 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 RUSC1Q9BVN2 902 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 DPH5Q9H2P9 285 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 MYH7BA7E2Y1 1941 aa13.39□□□□□ -0.27
CCDC78-213ENST00000482878 SRRM3A6NNA2 597 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 A8MUI8 341 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 FAM86B1E9PN63 330 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 GCNT3O95395 438 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 FAM86B2P0C5J1 330 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 DRD4P21917 467 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 ANKRD20A2Q5SQ80 823 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 ANKRD20A1Q5TYW2 823 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 ANKRD20A3Q5VUR7 823 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 HES6Q96HZ4 224 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 BHMT2Q9H2M3 363 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 KCNQ5Q9NR82 932 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 TYW1Q9NV66 732 aaKnown RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 A0A0A6YYK5 440 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 CFAP73A6NFT4 308 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 MMP10P09238 476 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 TAL1P17542 331 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 ALDH5A1P51649 535 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 BIRC3Q13489 604 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 BLMHQ13867 455 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 VPS36Q86VN1 386 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 EZH1Q92800 747 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 IGF2BP3O00425 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 SLC26A4O43511 780 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 RTN3O95197 1032 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 FGGP02679 453 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 FESP07332 822 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 DHX9Q08211 1270 aaKnown RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 USP4Q13107 963 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 TRIM74Q86UV6 250 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 TRIM73Q86UV7 250 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 MFN1Q8IWA4 741 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 LMNTD2Q8IXW0 634 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 CERKQ8TCT0 537 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 XPO6Q96QU8 1125 aaKnown RBP13.38□□□□□ -0.27
CCDC78-213ENST00000482878 TRIM51Q9BSJ1 452 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 SLITRK6Q9H5Y7 841 aa13.38□□□□□ -0.27
CCDC78-213ENST00000482878 TGFB1I1O43294 461 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 GDF11O95390 407 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 MMEP08473 750 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 POU5F1Q01860 360 aaKnown RBP13.37□□□□□ -0.27
CCDC78-213ENST00000482878 NFIAQ12857 509 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 BMT2Q1RMZ1 405 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 GLYCTKQ8IVS8 523 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 ZFPM1Q8IX07 1006 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 SEC14L1Q92503 715 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 METTL14Q9HCE5 456 aaKnown RBP13.37□□□□□ -0.27
CCDC78-213ENST00000482878 SLC5A4Q9NY91 659 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 PPP1R9AQ9ULJ8 1098 aa13.37□□□□□ -0.27
CCDC78-213ENST00000482878 MYO3BQ8WXR4 1341 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms