RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, human

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDGF-208	ENST00000482651	METTL13	Q8N6R0	699 aa		9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	ATXN2L	Q8WWM7	1075 aa	Known RBP	9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	TNFRSF25	Q93038	417 aa		9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	FOXP1	Q9H334	677 aa	Predicted RBP	9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	RC3H2	Q9HBD1	1191 aa	Known RBP	9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	ERVK-5	Q9HDB9	667 aa		9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	GINS2	Q9Y248	185 aa		9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	NOC2L	Q9Y3T9	749 aa	Known RBP	9.81	□□□□□ -0.84
HDGF-208	ENST00000482651		A0A0C4DFX4	3053 aa		9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	ADGRA3	Q8IWK6	1321 aa		9.81	□□□□□ -0.84
HDGF-208	ENST00000482651	SCAMP3	O14828	347 aa	Known RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	TBX3	O15119	743 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	GPR182	O15218	404 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	GPR32	O75388	356 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	RPS6KA5	O75582	802 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	VTN	P04004	478 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	NFX1	Q12986	1120 aa	Known RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	PPP2R5C	Q13362	524 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	HSP90AA2P	Q14568	343 aa	Predicted RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	COL19A1	Q14993	1142 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	TARBP2	Q15633	366 aa	Known RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	KIZ	Q2M2Z5	673 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	TMEM266	Q2M3C6	531 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	EPC2	Q52LR7	807 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	HS1BP3	Q53T59	392 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	SWT1	Q5T5J6	900 aa	Known RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	MCTP1	Q6DN14	999 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	EFCAB12	Q6NXP0	572 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	RTN4RL1	Q86UN2	441 aa	Predicted RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	TMEM192	Q8IY95	271 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	CRIPAK	Q8N1N5	446 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	LRRC71	Q8N4P6	559 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	FIBCD1	Q8N539	461 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	TMEM40	Q8WWA1	233 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	ZNF689	Q96CS4	500 aa	Predicted RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	MAP7D2	Q96T17	732 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	OSMR	Q99650	979 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	NIFK	Q9BYG3	293 aa	Known RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	TMX1	Q9H3N1	280 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	FKBPL	Q9UIM3	349 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	VAV3	Q9UKW4	847 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	NOL7	Q9UMY1	257 aa	Known RBP	9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	KIAA1024	Q9UPX6	916 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	AKT3	Q9Y243	479 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	GBF1	Q92538	1859 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	PTPRS	Q13332	1948 aa		9.8	□□□□□ -0.84
HDGF-208	ENST00000482651	VPS37C	A5D8V6	355 aa	Predicted RBP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	FAM205C	A6NFA0	338 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651		H3BNC9	293 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	EML1	O00423	815 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	DKC1	O60832	514 aa	Known RBP eCLIP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	DGKI	O75912	1065 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	STBD1	O95210	358 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	BAG4	O95429	457 aa	Known RBP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	STAG3L1	P0CL83	205 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	SARS	P49591	514 aa	Known RBP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	PSMC5	P62195	406 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	MRPS5	P82675	430 aa	Known RBP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	TBC1D8B	Q0IIM8	1120 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	PROX2	Q3B8N5	592 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	FAM228A	Q86W67	206 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	RNF135	Q8IUD6	432 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	DIS3L2	Q8IYB7	885 aa	Known RBP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	HAS1	Q92839	578 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	ASB2	Q96Q27	587 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	CEP89	Q96ST8	783 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	PPP1R16B	Q96T49	567 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	ADAMTS10	Q9H324	1103 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	C1orf112	Q9NSG2	853 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	SEPT3	Q9UH03	358 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	SEPT9	Q9UHD8	586 aa	Predicted RBP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	ST3GAL5	Q9UNP4	418 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	COG5	Q9UP83	839 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	RWDD3	Q9Y3V2	267 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	PRUNE2	Q8WUY3	3088 aa		9.79	□□□□□ -0.84
HDGF-208	ENST00000482651	IGKV6-21	A0A0C4DH24	114 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	DENND3	A2RUS2	1198 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	BTBD18	B2RXH4	712 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	C5orf67	F2Z3F1	127 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	STX6	O43752	255 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	MARCH6	O60337	910 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	MGEA5	O60502	916 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	OFD1	O75665	1012 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	RB1	P06400	928 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	P4HB	P07237	508 aa	Known RBP	9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	LINC00271	P0C7V0	271 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	SYT1	P21579	422 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	CTNNB1	P35222	781 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	BMPR1A	P36894	532 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	QARS	P47897	775 aa	Known RBP	9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	GPC3	P51654	580 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	NLRP11	P59045	1033 aa	Known RBP	9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	NUCB2	P80303	420 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	GUCY1B3	Q02153	619 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	GPM6B	Q13491	265 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	MTMR3	Q13615	1198 aa		9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	BTG3	Q14201	252 aa	Predicted RBP	9.78	□□□□□ -0.84
HDGF-208	ENST00000482651	EPHA7	Q15375	998 aa		9.78	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms