RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ICA1Q05084 483 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 TMED2Q15363 201 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 CERKLQ49MI3 558 aaPredicted RBP13.69□□□□□ -0.22
VPS52-218ENST00000482399 CBWD6Q4V339 395 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 CBWD3Q5JTY5 395 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 CBWD5Q5RIA9 395 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 ZNF365Q70YC5 407 aa13.69□□□□□ -0.22
VPS52-218ENST00000482399 EIF2AK1Q9BQI3 630 aaKnown RBP13.69□□□□□ -0.22
VPS52-218ENST00000482399 PASKQ96RG2 1323 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 A8MUI8 341 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 RASSF9O75901 435 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 ECEL1O95672 775 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 PDE6CP51160 858 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 ELF3P78545 371 aaPredicted RBP13.68□□□□□ -0.22
VPS52-218ENST00000482399 NFIAQ12857 509 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 MAPK7Q13164 816 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
VPS52-218ENST00000482399 AMNQ9BXJ7 453 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 YIPF3Q9GZM5 350 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 ETNK1Q9HBU6 452 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 EMSYQ7Z589 1322 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 ECHS1P30084 290 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 FAM196AQ6ZSG2 479 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 YTHDF3Q7Z739 585 aaKnown RBP13.68□□□□□ -0.22
VPS52-218ENST00000482399 LRRC57Q8N9N7 239 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 HOMER2Q9NSB8 354 aa13.68□□□□□ -0.22
VPS52-218ENST00000482399 TTC7AQ9ULT0 858 aaPredicted RBP13.68□□□□□ -0.22
VPS52-218ENST00000482399 TCRBV7S2A1N4TA0A589 114 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 PDXKO00764 312 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 CYP26A1O43174 497 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 PDHA1P08559 390 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 ZNF131P52739 623 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 ADCY2Q08462 1091 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 DRP2Q13474 957 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 EPHA7Q15375 998 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 CCDC6Q16204 474 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 PREPLQ4J6C6 727 aaPredicted RBP13.67□□□□□ -0.22
VPS52-218ENST00000482399 KAT5Q92993 513 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 FAM84AQ96KN4 292 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 IFT74Q96LB3 600 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 DDX4Q9NQI0 724 aaKnown RBP13.67□□□□□ -0.22
VPS52-218ENST00000482399 NARFQ9UHQ1 456 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 SETDB1Q15047 1291 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 PNMA3Q9UL41 463 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 H0YGN5 161 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 ERMARDQ5T6L9 678 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 DAB2IPQ5VWQ8 1189 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 TGS1Q96RS0 853 aaKnown RBP13.67□□□□□ -0.22
VPS52-218ENST00000482399 NFS1Q9Y697 457 aa13.67□□□□□ -0.22
VPS52-218ENST00000482399 GPR75-ASB3A0A0A6YYF3 556 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 FAM86B1E9PN63 330 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 FAM86B2P0C5J1 330 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 PPP4CP60510 307 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 CPXCR1Q8N123 301 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 HAUS1Q96CS2 278 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 VPS37BQ9H9H4 285 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 KLHL11Q9NVR0 708 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.66□□□□□ -0.22
VPS52-218ENST00000482399 LRP6O75581 1613 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 EML1O00423 815 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 PTENP60484 403 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 RNF207Q6ZRF8 634 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 AGPAT1Q99943 283 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 NUP85Q9BW27 656 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 STK33Q9BYT3 514 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 TRPC6Q9Y210 931 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 HIP1RO75146 1068 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 PYGMP11217 842 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 BRD2P25440 801 aaKnown RBP13.66□□□□□ -0.22
VPS52-218ENST00000482399 SLC12A3P55017 1021 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 KRT17Q04695 432 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 TAF11Q15544 211 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 NAIF1Q69YI7 327 aaPredicted RBP13.66□□□□□ -0.22
VPS52-218ENST00000482399 PRUNE1Q86TP1 453 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 AGAP11Q8TF27 550 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 BICD1Q96G01 975 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 CCDC77Q9BR77 488 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 TRIM7Q9C029 511 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 NOP53Q9NZM5 478 aaKnown RBP13.66□□□□□ -0.22
VPS52-218ENST00000482399 APEX2Q9UBZ4 518 aa13.66□□□□□ -0.22
VPS52-218ENST00000482399 PIAS1O75925 651 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 GH1P01241 217 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 ATF7P17544 494 aaPredicted RBP13.65□□□□□ -0.22
VPS52-218ENST00000482399 GPC5P78333 572 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 ZBTB16Q05516 673 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 RBM26Q5T8P6 1007 aaKnown RBP13.65□□□□□ -0.22
VPS52-218ENST00000482399 CCT6BQ92526 530 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 SAAL1Q96ER3 474 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 PITPNM3Q9BZ71 974 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 PARP2Q9UGN5 583 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 USP15Q9Y4E8 981 aaPredicted RBP13.65□□□□□ -0.22
VPS52-218ENST00000482399 TMEM253P0C7T8 217 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.22
VPS52-218ENST00000482399 ATF2P15336 505 aa13.65□□□□□ -0.22
VPS52-218ENST00000482399 ALDH5A1P51649 535 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms