RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 KRT35Q92764 455 aa16.74■□□□□ 0.27
CNKSR1-207ENST00000482227 TSC22D3Q99576 134 aa16.74■□□□□ 0.27
CNKSR1-207ENST00000482227 TRIM7Q9C029 511 aa16.74■□□□□ 0.27
CNKSR1-207ENST00000482227 PIDD1Q9HB75 910 aa16.74■□□□□ 0.27
CNKSR1-207ENST00000482227 TAS2R14Q9NYV8 317 aa16.74■□□□□ 0.27
CNKSR1-207ENST00000482227 BCL9O00512 1426 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 IRF6O14896 467 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 TP73O15350 636 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 TPBGLP0DKB5 382 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 GBP1P32455 592 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 CTNNBL1Q8WYA6 563 aaPredicted RBP16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 THAP2Q9H0W7 228 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 CTNNAL1Q9UBT7 734 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 PARP2Q9UGN5 583 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 ITGB4P16144 1822 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 SCN7AQ01118 1682 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 GPR75-ASB3A0A0A6YYF3 556 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 POTECB2RU33 542 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 ATP6V1C1P21283 382 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 CASP4P49662 377 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 CCDC15Q0P6D6 951 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 PARP6Q2NL67 630 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 TCERG1LQ5VWI1 586 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 CCDC137Q6PK04 289 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 PALB2Q86YC2 1186 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 SH3RF3Q8TEJ3 882 aaPredicted RBP16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 UIMC1Q96RL1 719 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 TGS1Q96RS0 853 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 ZHX3Q9H4I2 956 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 AAASQ9NRG9 546 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 KLHL14Q9P2G3 628 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 CPSF2Q9P2I0 782 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 ASB3Q9Y575 518 aa16.73■□□□□ 0.27
CNKSR1-207ENST00000482227 NPTXRO95502 500 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 STAT1P42224 750 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 TNNI2P48788 182 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 RAD23BP54727 409 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 CCDC25Q86WR0 208 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 PIGOQ8TEQ8 1089 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 STK32AQ8WU08 396 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 RAB3IPQ96QF0 476 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 LRMDAQ9H2I8 198 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 CDC42EP4Q9H3Q1 356 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 KCNK9Q9NPC2 374 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 CYP39A1Q9NYL5 469 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 TFCP2L1Q9NZI6 479 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 NIP7Q9Y221 180 aaKnown RBP eCLIP16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 ALG6Q9Y672 507 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 TCRBV7S2A1N4TA0A589 114 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 SMIM24O75264 130 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 PDHA1P08559 390 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 LMNB1P20700 586 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 ADCY7P51828 1080 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 ROR2Q01974 943 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 ACVR2BQ13705 512 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 KNOP1Q1ED39 458 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 CMPK2Q5EBM0 449 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 MFN1Q8IWA4 741 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 RUNDC3BQ96NL0 473 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 SERPINB12Q96P63 405 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 NT5C3AQ9H0P0 336 aa16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 DDX25Q9UHL0 483 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-207ENST00000482227 E7ENQ6 273 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 ABLIM1O14639 778 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 ACSL3O95573 720 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 SMARCA1P28370 1054 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 SOX5P35711 763 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 MRPS35P82673 323 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 MTFR1Q15390 333 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 FAM13CQ8NE31 585 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 TMEM237Q96Q45 408 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 MYLK2Q9H1R3 596 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 RIOX1Q9H6W3 641 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 PCDHA12Q9UN75 941 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 ABCA3Q99758 1704 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 LRRD1A4D1F6 860 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 USP17L5A8MUK1 530 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 RTN3O95197 1032 aaPredicted RBP16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 PCK1P35558 622 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 PEX5P50542 639 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 SLC12A3P55017 1021 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 CLUL1Q15846 466 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 INTS5Q6P9B9 1019 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 TRMT10CQ7L0Y3 403 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 EPM2AIP1Q7L775 607 aaPredicted RBP16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 FBF1Q8TES7 1133 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 TEKT4Q8WW24 435 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 GPR88Q9GZN0 384 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 PTPN22Q9Y2R2 807 aa16.71■□□□□ 0.27
CNKSR1-207ENST00000482227 SYNGAP1Q96PV0 1343 aa16.71■□□□□ 0.26
CNKSR1-207ENST00000482227 BRAFP15056 766 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 MXRA7P84157 204 aa16.7■□□□□ 0.26
CNKSR1-207ENST00000482227 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms