RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 KIAA1586Q9HCI6 787 aa12.78□□□□□ -0.36
GGPS1-205ENST00000482013 HSPBP1Q9NZL4 362 aa12.78□□□□□ -0.36
GGPS1-205ENST00000482013 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
GGPS1-205ENST00000482013 TLL2Q9Y6L7 1015 aa12.78□□□□□ -0.36
GGPS1-205ENST00000482013 SSU72P8A0A1W2PR75 194 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 EIF3CLB5ME19 914 aaKnown RBP12.77□□□□□ -0.37
GGPS1-205ENST00000482013 ASAP2O43150 1006 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 NDUFA10O95299 355 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 SNAI1O95863 264 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-205ENST00000482013 HOXC6P09630 235 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 FMO5P49326 533 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 EFNA5P52803 228 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 ARHGAP1Q07960 439 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 CETN1Q12798 172 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 STRN3Q13033 797 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-205ENST00000482013 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-205ENST00000482013 PLCB4Q15147 1175 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-205ENST00000482013 HSDL1Q3SXM5 330 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 DCAF17Q5H9S7 520 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-205ENST00000482013 ZNF484Q5JVG2 852 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 KLHDC7AQ5VTJ3 777 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 SLFN12LQ6IEE8 588 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 RRAGAQ7L523 313 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 USP37Q86T82 979 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 PPTC7Q8NI37 304 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 TMC2Q8TDI7 906 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 FBXL18Q96ME1 805 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 EIF3CQ99613 913 aaKnown RBP12.77□□□□□ -0.37
GGPS1-205ENST00000482013 CHP1Q99653 195 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 TINF2Q9BSI4 451 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 GANQ9H2C0 597 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 PDGFCQ9NRA1 345 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 MYO1AQ9UBC5 1043 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 BZW2Q9Y6E2 419 aaKnown RBP12.77□□□□□ -0.37
GGPS1-205ENST00000482013 STYXL1Q9Y6J8 313 aa12.77□□□□□ -0.37
GGPS1-205ENST00000482013 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
GGPS1-205ENST00000482013 EPHB6O15197 1021 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 TLR2O60603 784 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 PPFIA4O75335 1185 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 IPO7O95373 1038 aaKnown RBP12.76□□□□□ -0.37
GGPS1-205ENST00000482013 HOXD8P13378 290 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-205ENST00000482013 RFX1P22670 979 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 GLRA2P23416 452 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 PON1P27169 355 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 ANXA13P27216 316 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 GTF2H1P32780 548 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 VAMP7P51809 220 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 MTF1Q14872 753 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 DUSP28Q4G0W2 176 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 SFMBT2Q5VUG0 894 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 DPY19L2P1Q6NXN4 242 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 TRIM65Q6PJ69 517 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 C17orf99Q6UX52 265 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 TXLNBQ8N3L3 684 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 CCDC155Q8N6L0 562 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 DEPTORQ8TB45 409 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 HAUS4Q9H6D7 363 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 NHEJ1Q9H9Q4 299 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-205ENST00000482013 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 ERAP1Q9NZ08 941 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 COL1A2P08123 1366 aa12.76□□□□□ -0.37
GGPS1-205ENST00000482013 LRRC53A6NM62 1247 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 ANKRD63C9JTQ0 380 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 K7ERI5 159 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 MAGEB2O15479 319 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 LCA5LO95447 670 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
GGPS1-205ENST00000482013 SERPING1P05155 500 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 UCHL3P15374 230 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 TM4SF4P48230 202 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
GGPS1-205ENST00000482013 POU5F1BQ06416 359 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 ACVR2BQ13705 512 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 SLC9C1Q4G0N8 1177 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 TAS1R3Q7RTX0 852 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 ASAP3Q8TDY4 903 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 USP6NLQ92738 828 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 COPS5Q92905 334 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 TMEM143Q96AN5 459 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 MFSD14AQ96MC6 490 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 CBWD1Q9BRT8 395 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 CRACR2AQ9BSW2 395 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 C2orf40Q9H1Z8 148 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 IKZF4Q9H2S9 585 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 PCIF1Q9H4Z3 704 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 CPA4Q9UI42 421 aa12.75□□□□□ -0.37
GGPS1-205ENST00000482013 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 FAM155AB1AL88 458 aaPredicted RBP12.74□□□□□ -0.37
GGPS1-205ENST00000482013 ADCY3O60266 1144 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 LGALS2P05162 132 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 SLC9A1P19634 815 aa12.74□□□□□ -0.37
GGPS1-205ENST00000482013 ADSSP30520 456 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms