RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 JAKMIP3Q5VZ66 844 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 DCLRE1AQ6PJP8 1040 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 DHX32Q7L7V1 743 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 FAM228AQ86W67 206 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ABI1Q8IZP0 508 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ZNF713Q8N859 430 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 BCL7CQ8WUZ0 217 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ATRIPQ8WXE1 791 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 CRYGNQ8WXF5 182 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 MYADMQ96S97 322 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 GLT8D2Q9H1C3 349 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 EPC1Q9H2F5 836 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ELAC1Q9H777 363 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ANGPTL2Q9UKU9 493 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 PCDHGA2Q9Y5H1 932 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 SLC30A4O14863 429 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 ADAMTS3O15072 1205 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 GPR182O15218 404 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 CYP3A4P08684 503 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 MYBP10242 640 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 BCAR1P56945 870 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 SPEM2Q0P670 501 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 DSC3Q14574 896 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 NONOQ15233 471 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 ADCK5Q3MIX3 580 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 MIS18BP1Q6P0N0 1132 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 TSSK4Q6SA08 328 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 FAM43BQ6ZT52 329 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 SKAP1Q86WV1 359 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 CKAP2LQ8IYA6 745 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 HELQQ8TDG4 1101 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 TMEM169Q96HH4 297 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 OSMRQ99650 979 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 FBXO4Q9UKT5 387 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 CACNA1IQ9P0X4 2223 aa10.67□□□□□ -0.7
SMARCE1-210ENST00000481231 CEP295Q9C0D2 2601 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 HOXA2O43364 376 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 ZC3H11AO75152 810 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 GPR32O75388 356 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 VTNP04004 478 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 CTSAP10619 480 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 ADD1P35611 737 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 ALDH7A1P49419 539 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 CRYBB1P53674 252 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 RCAN1P53805 252 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 BMS1Q14692 1282 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 PFKFB3Q16875 520 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 TSGA10IPQ3SY00 556 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 BMP2KLQ5H9B9 411 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 ODR4Q5SWX8 454 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 ZNF746Q6NUN9 644 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 REXO1Q8N1G1 1221 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 METTL13Q8N6R0 699 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 ZBTB44Q8NCP5 570 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 NETO1Q8TDF5 533 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 ZNF577Q9BSK1 485 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 EPS15L1Q9UBC2 864 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 GMEB2Q9UKD1 530 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 NAP1L2Q9ULW6 460 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 MTF2Q9Y483 593 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 MAFBQ9Y5Q3 323 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 IRAK3Q9Y616 596 aa10.66□□□□□ -0.7
SMARCE1-210ENST00000481231 CLUHO75153 1309 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 C2orf16Q68DN1 1984 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 ESYT2A0FGR8 921 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 LILRB5O75023 590 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 PMLP29590 882 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 CLCN3P51790 818 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 CLCN4P51793 760 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 SETQ01105 290 aaPredicted RBP10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 PRR16Q569H4 304 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 C15orf39Q6ZRI6 1047 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 TRMT1LQ7Z2T5 733 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 ECHDC2Q86YB7 292 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 SMAP1Q8IYB5 467 aaPredicted RBP10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 VN1R3Q9BXE9 311 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 BCO2Q9BYV7 579 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 ZMYND12Q9H0C1 365 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 TBC1D22BQ9NU19 505 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 ZSCAN32Q9NX65 697 aa10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 SETXQ7Z333 2677 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-210ENST00000481231 ZNF862O60290 1169 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 GDF9O60383 454 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 PSAPP07602 524 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 CPA1P15085 419 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 KLRC2P26717 231 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 NLRP11P59045 1033 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 STARD6P59095 220 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 SNW1Q13573 536 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 HTR4Q13639 388 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 KRT32Q14532 448 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 UBXN2BQ14CS0 331 aa10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 N4BP2L1Q5TBK1 243 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1-210ENST00000481231 PPFIBP1Q86W92 1011 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms