RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ZEB2O60315 1214 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 PRDM1O75626 825 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 CABYRO75952 493 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 TIMP1P01033 207 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 FGRP09769 529 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 MX1P20591 662 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 NOVP48745 357 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 NT5C2P49902 561 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 FPGSQ05932 587 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 IKZF1Q13422 519 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 PWP2Q15269 919 aaKnown RBP7.61□□□□□ -1.19
LRCH3-216ENST00000481048 ALX1Q15699 326 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 CCDC144BQ3MJ40 725 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 C9orf50Q5SZB4 431 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 IQSEC1Q6DN90 963 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 NXPE4Q6UWF7 544 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 CCDC129Q6ZRS4 1044 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 ARMCX2Q7L311 632 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 FAM133AQ8N9E0 248 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 ASB11Q8WXH4 323 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 EVI5LQ96CN4 794 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 PNMA2Q9UL42 364 aa7.61□□□□□ -1.19
LRCH3-216ENST00000481048 LAMA2P24043 3122 aaKnown RBP7.61□□□□□ -1.19
LRCH3-216ENST00000481048 A0A0U1RQG5 324 aaPredicted RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 LRRC10BA6NIK2 292 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 ARVCFO00192 962 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 TLR3O15455 904 aaKnown RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 ORC4O43929 436 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 PQBP1O60828 265 aaKnown RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 ASGR1P07306 291 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 C6orf222P0C671 652 aaPredicted RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 PCP11498 1178 aaKnown RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 MCCP23508 829 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 ITGB8P26012 769 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 ZP2Q05996 745 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 ZNF252P-AS1Q0IIN9 211 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 IKQ13123 557 aaPredicted RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 PPIGQ13427 754 aaKnown RBP eCLIP7.6□□□□□ -1.191e-9■□□□□ 10.8
LRCH3-216ENST00000481048 PPM1JQ5JR12 505 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 TSHZ3Q63HK5 1081 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 MFSD5Q6N075 450 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 ZSWIM9Q86XI8 627 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 CCDC144CPQ8IYA2 1237 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 LRRC47Q8N1G4 583 aaKnown RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 TMEM199Q8N511 208 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 RNPC3Q96LT9 517 aaKnown RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 FGD4Q96M96 766 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 SEC62Q99442 399 aaKnown RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 CDX2Q99626 313 aaPredicted RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 MAF1Q9H063 256 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 KATNBL1Q9H079 304 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 HELLSQ9NRZ9 838 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 TCP11L1Q9NUJ3 509 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 ZHX1Q9UKY1 873 aaPredicted RBP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 TBX21Q9UL17 535 aa7.6□□□□□ -1.19
LRCH3-216ENST00000481048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.6□□□□□ -1.19
LRCH3-216ENST00000481048 CDH23Q9H251 3354 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 ZNF536O15090 1300 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 SALL3Q9BXA9 1300 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 MYH7BA7E2Y1 1941 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 LCTP09848 1927 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 ICAM1P05362 532 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 TNFAIP2Q03169 654 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 MESP2Q0VG99 397 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 HDAC1Q13547 482 aaPredicted RBP7.59□□□□□ -1.19
LRCH3-216ENST00000481048 KCNMB1Q16558 191 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRCH3-216ENST00000481048 FBLN7Q53RD9 439 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 BTNL9Q6UXG8 535 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 TMC7Q7Z402 723 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 SPACA3Q8IXA5 215 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 MORC4Q8TE76 937 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 DCAF4Q8WV16 495 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 FAM84AQ96KN4 292 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 TTC14Q96N46 770 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 AP5M1Q9H0R1 490 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 A1CFQ9NQ94 594 aaKnown RBP7.59□□□□□ -1.19
LRCH3-216ENST00000481048 IL17RBQ9NRM6 502 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 RNF146Q9NTX7 359 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 CYP39A1Q9NYL5 469 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRCH3-216ENST00000481048 ADD3Q9UEY8 706 aaKnown RBP7.59□□□□□ -1.19
LRCH3-216ENST00000481048 STX8Q9UNK0 236 aa7.59□□□□□ -1.19
LRCH3-216ENST00000481048 GNEQ9Y223 722 aaKnown RBP7.59□□□□□ -1.19
LRCH3-216ENST00000481048 SCN10AQ9Y5Y9 1956 aa7.59□□□□□ -1.2
LRCH3-216ENST00000481048 ZMYM6O95789 1325 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 CTAGE5O15320 804 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 RANBP6O60518 1105 aaKnown RBP7.58□□□□□ -1.2
LRCH3-216ENST00000481048 CD4P01730 458 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 TOP1P11387 765 aaKnown RBP7.58□□□□□ -1.2
LRCH3-216ENST00000481048 ALAS1P13196 640 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 PDE1AP54750 535 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 MFAP1P55081 439 aaKnown RBP7.58□□□□□ -1.2
LRCH3-216ENST00000481048 CNTN2Q02246 1040 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 MCMDC2Q4G0Z9 681 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 LCE4AQ5TA78 99 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 ANKRD45Q5TZF3 282 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 RASIP1Q5U651 963 aa7.58□□□□□ -1.2
LRCH3-216ENST00000481048 SPOCD1Q6ZMY3 1216 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms