RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 SPARCL1Q14515 664 aa4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 RBM20Q5T481 1227 aaKnown RBP4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 TMEM53Q6P2H8 277 aa4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 LVRNQ6Q4G3 990 aa4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 G2E3Q7L622 706 aa4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 MINDY2Q8NBR6 621 aa4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 OTUD5Q96G74 571 aa4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 SMARCAD1Q9H4L7 1026 aa4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 GPCPD1Q9NPB8 672 aa4.84□□□□□ -1.64
GPCPD1-205ENST00000481038 IQANK1A0A1B0GTG1 560 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 GYG2O15488 501 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 CALML3P27482 149 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 RFC5P40937 340 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 CCT3P49368 545 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TMTC3Q6ZXV5 915 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 XAGE2Q96GT9 111 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 MTMR9Q96QG7 549 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ISCA1Q9BUE6 129 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 VPS33BQ9H267 617 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 A1CFQ9NQ94 594 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TCP11L1Q9NUJ3 509 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 PARP2Q9UGN5 583 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 AGTPBP1Q9UPW5 1226 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 PXDNQ92626 1479 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 PLSCR1O15162 318 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 GADD45BO75293 160 aaPredicted RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ITGAXP20702 1163 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 CDH3P22223 829 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 SYKP43405 635 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 C21orf59P57076 290 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 BTKQ06187 659 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 SSRP1Q08945 709 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 DLGAP5Q15398 846 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 CDC37L1Q7L3B6 337 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 HPS1Q92902 700 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 HPS3Q969F9 1004 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 INTS4Q96HW7 963 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TBATAQ96M53 351 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 BARX2Q9UMQ3 279 aaPredicted RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 RBMX2Q9Y388 322 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TTLL3Q9Y4R7 772 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ZC3H11AO75152 810 aaKnown RBP eCLIP4.83□□□□□ -1.641e-6■■■■□ 19.7
GPCPD1-205ENST00000481038 CHEK2O96017 543 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 P4HA1P13674 534 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 EFR3AQ14156 821 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 LBRQ14739 615 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TMEM266Q2M3C6 531 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 BBS9Q3SYG4 887 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TRIM67Q6ZTA4 783 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 IFNL1Q8IU54 200 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TTC39CQ8N584 583 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ESYT1Q9BSJ8 1104 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 USP44Q9H0E7 712 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ZMAT5Q9UDW3 170 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 GTF2A1LQ9UNN4 478 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 GPC6Q9Y625 555 aaPredicted RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 AHDC1Q5TGY3 1603 aaPredicted RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 MYL3P08590 195 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 PPP2R5CQ13362 524 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 RGS21Q2M5E4 152 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 SMU1Q2TAY7 513 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 UNC45BQ8IWX7 931 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 AGGF1Q8N302 714 aaeCLIP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 CCT8L2Q96SF2 557 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 EPAS1Q99814 870 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 KLHL42Q9P2K6 505 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 DCDC2Q9UHG0 476 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 NOVA2Q9UNW9 492 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ZNF804BA4D1E1 1349 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 MUSKO15146 869 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TSPAN1O60635 241 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 PDE8BO95263 885 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 PYGMP11217 842 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 SDSP20132 328 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 UBE3CQ15386 1083 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ARSHQ5FYA8 562 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ATL3Q6DD88 541 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 STYK1Q6J9G0 422 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 TTLL7Q6ZT98 887 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 BRSK2Q8IWQ3 736 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 SPATA5Q8NB90 893 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 CCDC17Q96LX7 622 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 DSCC1Q9BVC3 393 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 ACAT2Q9BWD1 397 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 VIPAS39Q9H9C1 493 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 DDX18Q9NVP1 670 aaKnown RBP4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 SELENONQ9NZV5 590 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 MPP6Q9NZW5 540 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 STK39Q9UEW8 545 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 FHOD1Q9Y613 1164 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 PASKQ96RG2 1323 aa4.83□□□□□ -1.64
GPCPD1-205ENST00000481038 H0Y626 953 aa4.82□□□□□ -1.64
GPCPD1-205ENST00000481038 CRTAPO75718 401 aaPredicted RBP4.82□□□□□ -1.64
GPCPD1-205ENST00000481038 FSBPO95073 299 aa4.82□□□□□ -1.64
GPCPD1-205ENST00000481038 KRT15P19012 456 aa4.82□□□□□ -1.64
GPCPD1-205ENST00000481038 PPARGP37231 505 aaPredicted RBP4.82□□□□□ -1.64
GPCPD1-205ENST00000481038 MAP3K10Q02779 954 aa4.82□□□□□ -1.64
GPCPD1-205ENST00000481038 NFIAQ12857 509 aa4.82□□□□□ -1.64
GPCPD1-205ENST00000481038 SUZ12Q15022 739 aaKnown RBP4.82□□□□□ -1.64
GPCPD1-205ENST00000481038 GPR162Q16538 588 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms