RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 ZC3H11AO75152 810 aaKnown RBP eCLIP21.08■□□□□ 0.979e-6■■■■□ 23.7
ABCF3-214ENST00000480562 NEFLP07196 543 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 SRGAP2CP0DJJ0 459 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 CA8P35219 290 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 POLGP54098 1239 aaPredicted RBP21.08■□□□□ 0.97
ABCF3-214ENST00000480562 EPHA7Q15375 998 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 NCAPH2Q6IBW4 605 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 TMEM173Q86WV6 379 aaPredicted RBP21.08■□□□□ 0.97
ABCF3-214ENST00000480562 NECAB1Q8N987 351 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 PRPF31Q8WWY3 499 aaKnown RBP21.08■□□□□ 0.97
ABCF3-214ENST00000480562 SLC7A3Q8WY07 619 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 LXNQ9BS40 222 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 CDH22Q9UJ99 828 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 TBX3O15119 743 aa21.07■□□□□ 0.96
ABCF3-214ENST00000480562 SKIP12755 728 aa21.07■□□□□ 0.96
ABCF3-214ENST00000480562 FDPSP14324 419 aaKnown RBP21.07■□□□□ 0.96
ABCF3-214ENST00000480562 NR5A1Q13285 461 aa21.07■□□□□ 0.96
ABCF3-214ENST00000480562 GLB1LQ6UWU2 654 aa21.07■□□□□ 0.96
ABCF3-214ENST00000480562 TMEM169Q96HH4 297 aa21.07■□□□□ 0.96
ABCF3-214ENST00000480562 DYDC2Q96IM9 177 aa21.07■□□□□ 0.96
ABCF3-214ENST00000480562 DHX33Q9H6R0 707 aaKnown RBP21.07■□□□□ 0.96
ABCF3-214ENST00000480562 TBC1D13Q9NVG8 400 aa21.07■□□□□ 0.96
ABCF3-214ENST00000480562 ZBTB39O15060 712 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 CLASP2O75122 1294 aaKnown RBP21.06■□□□□ 0.96
ABCF3-214ENST00000480562 ZNF623O75123 536 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 OFD1O75665 1012 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 CXCL14O95715 111 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 SP100P23497 879 aaPredicted RBP21.06■□□□□ 0.96
ABCF3-214ENST00000480562 YWHABP31946 246 aaKnown RBP21.06■□□□□ 0.96
ABCF3-214ENST00000480562 CYP4A11Q02928 519 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 CTTNQ14247 550 aaKnown RBP21.06■□□□□ 0.96
ABCF3-214ENST00000480562 NOMO2Q5JPE7 1267 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 TRIM67Q6ZTA4 783 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 C4orf19Q8IY42 314 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 VPS52Q8N1B4 723 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 AUTS2Q8WXX7 1259 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 NAP1L4Q99733 375 aaKnown RBP21.06■□□□□ 0.96
ABCF3-214ENST00000480562 GBP3Q9H0R5 595 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 NRDE2Q9H7Z3 1164 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 MINDY3Q9H8M7 445 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 AGPAT5Q9NUQ2 364 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 PCDHB2Q9Y5E7 798 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 HCFC2Q9Y5Z7 792 aa21.06■□□□□ 0.96
ABCF3-214ENST00000480562 TMEM221A6NGB7 291 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 M0R296 226 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 LARGE1O95461 756 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 HOXB8P17481 243 aaPredicted RBP21.05■□□□□ 0.96
ABCF3-214ENST00000480562 KRT2P35908 639 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 RFC5P40937 340 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 RAB27AP51159 221 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 ANAPC15P60006 121 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 ZXDAP98168 799 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 SPIRE1Q08AE8 756 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 LAMTOR4Q0VGL1 99 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 EMC2Q15006 297 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 ANKRD1Q15327 319 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 XKR9Q5GH70 373 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 BCL7CQ8WUZ0 217 aaPredicted RBP21.05■□□□□ 0.96
ABCF3-214ENST00000480562 PSPC1Q8WXF1 523 aaKnown RBP21.05■□□□□ 0.96
ABCF3-214ENST00000480562 WASF1Q92558 559 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 CASP10Q92851 521 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 MFSD14AQ96MC6 490 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 FBXL18Q96ME1 805 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 ZBP1Q9H171 429 aa21.05■□□□□ 0.96
ABCF3-214ENST00000480562 B4GALT3O60512 393 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 GALTP07902 379 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 FOSBP53539 338 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 RNASELQ05823 741 aaKnown RBP21.04■□□□□ 0.96
ABCF3-214ENST00000480562 ME3Q16798 604 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 OTUD6AQ7L8S5 288 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 SRGAP1Q7Z6B7 1085 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 TPH2Q8IWU9 490 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 EXOC8Q8IYI6 725 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 TNFRSF25Q93038 417 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 IGSF21Q96ID5 467 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 ZSWIM4Q9H7M6 989 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 DNAJB4Q9UDY4 337 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 PPME1Q9Y570 386 aa21.04■□□□□ 0.96
ABCF3-214ENST00000480562 ZNF318Q5VUA4 2279 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 WDFY4Q6ZS81 3184 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.03■□□□□ 0.96
ABCF3-214ENST00000480562 BAG4O95429 457 aaKnown RBP21.03■□□□□ 0.96
ABCF3-214ENST00000480562 HOXA11P31270 313 aaPredicted RBP21.03■□□□□ 0.96
ABCF3-214ENST00000480562 SLC11A1P49279 550 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 BMS1Q14692 1282 aaKnown RBP21.03■□□□□ 0.96
ABCF3-214ENST00000480562 AGMOQ6ZNB7 445 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 FERMT3Q86UX7 667 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 ZNF280BQ86YH2 543 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 SLFN12Q8IYM2 578 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 RNF149Q8NC42 400 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 PGBD4Q96DM1 585 aa21.03■□□□□ 0.96
ABCF3-214ENST00000480562 SLITRK3O94933 977 aa21.02■□□□□ 0.96
ABCF3-214ENST00000480562 AFF1P51825 1210 aaKnown RBP21.02■□□□□ 0.96
ABCF3-214ENST00000480562 TPRNQ4KMQ1 711 aa21.02■□□□□ 0.96
ABCF3-214ENST00000480562 UBXN11Q5T124 520 aa21.02■□□□□ 0.96
ABCF3-214ENST00000480562 DDX53Q86TM3 631 aaKnown RBP21.02■□□□□ 0.96
ABCF3-214ENST00000480562 C12orf76Q8N812 135 aaPredicted RBP21.02■□□□□ 0.96
ABCF3-214ENST00000480562 TCP11Q8WWU5 503 aa21.02■□□□□ 0.96
ABCF3-214ENST00000480562 RSPH1Q8WYR4 309 aa21.02■□□□□ 0.96
ABCF3-214ENST00000480562 GTF3C6Q969F1 213 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms