RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 Q3C1V9 767 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 BRDTQ58F21 947 aaPredicted RBP10.96□□□□□ -0.66
COMMD4-203ENST00000480484 AP1ARQ63HQ0 302 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 CCSAPQ6IQ19 270 aaPredicted RBP10.96□□□□□ -0.66
COMMD4-203ENST00000480484 UHMK1Q8TAS1 419 aaKnown RBP10.96□□□□□ -0.66
COMMD4-203ENST00000480484 IQCDQ96DY2 449 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 TAGLN3Q9UI15 199 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 FAM221BA6H8Z2 402 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 MYMKA6NI61 221 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 TTI1O43156 1089 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 GHRP10912 638 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 ITGA4P13612 1032 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 BTDP43251 543 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 KCNJ2P63252 427 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 KCNMA1Q12791 1236 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 AGBL2Q5U5Z8 902 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 MAEAQ7L5Y9 396 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 MAB21L3Q8N8X9 362 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 CEP120Q8N960 986 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 FAM133AQ8N9E0 248 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 P3H4Q92791 437 aa10.96□□□□□ -0.66
COMMD4-203ENST00000480484 LSM14BQ9BX40 385 aaKnown RBP10.96□□□□□ -0.66
COMMD4-203ENST00000480484 RTFDC1Q9BY42 306 aaPredicted RBP10.96□□□□□ -0.66
COMMD4-203ENST00000480484 NOP53Q9NZM5 478 aaKnown RBP10.96□□□□□ -0.66
COMMD4-203ENST00000480484 SSU72P8A0A1W2PR75 194 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L10C9JJH3 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 TSPAN6O43657 245 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 SLC37A4O43826 429 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 EDIL3O43854 480 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 SCGB1D2O95969 90 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 MYL1P05976 194 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 RASA1P20936 1047 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 CALML3P27482 149 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 MAN1A1P33908 653 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 KLHL30Q0D2K2 578 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 FAM83BQ5T0W9 1011 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 LRRC34Q8IZ02 419 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 KIF2BQ8N4N8 673 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 TMEM47Q9BQJ4 181 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 MTFR1LQ9H019 292 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 EBF2Q9HAK2 575 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 IFT122Q9HBG6 1241 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 HOMER2Q9NSB8 354 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 CHORDC1Q9UHD1 332 aaPredicted RBP10.95□□□□□ -0.66
COMMD4-203ENST00000480484 DICER1Q9UPY3 1922 aaKnown RBP10.95□□□□□ -0.66
COMMD4-203ENST00000480484 TDP2O95551 362 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 SEC13P55735 322 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 ERMARDQ5T6L9 678 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 TAX1BP1Q86VP1 789 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 TTC30AQ86WT1 665 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 WDR66Q8TBY9 1149 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 ANKS1AQ92625 1134 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 ZNF570Q96NI8 536 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 SEZ6LQ9BYH1 1024 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 FAM129AQ9BZQ8 928 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 BATF3Q9NR55 127 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 ABCF3Q9NUQ8 709 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 SEPT3Q9UH03 358 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 NR2E1Q9Y466 385 aa10.95□□□□□ -0.66
COMMD4-203ENST00000480484 ANKRD31Q8N7Z5 1873 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 SERPING1P05155 500 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 MYBL1P10243 752 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 KIF5BP33176 963 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 MAP2K1Q02750 393 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 GRM4Q14833 912 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 TMC3Q7Z5M5 1100 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 RPGRQ92834 1020 aaKnown RBP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 CCSER1Q9C0I3 900 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 AGAP1Q9UPQ3 857 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 NOC2LQ9Y3T9 749 aaKnown RBP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 FRMPD2Q68DX3 1309 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 A8MUI8 341 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 F8VZ95 297 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 PLSCR1O15162 318 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 PAEPP09466 180 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 C11orf91Q3C1V1 193 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 PLEKHG4Q58EX7 1191 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 TRPM8Q7Z2W7 1104 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 ZNF804AQ7Z570 1209 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 COA7Q96BR5 231 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 PRMT1Q99873 361 aaKnown RBP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 TRIM51Q9BSJ1 452 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 CNOT10Q9H9A5 744 aaKnown RBP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 CD209Q9NNX6 404 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 AJAP1Q9UKB5 411 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-203ENST00000480484 PCDHA4Q9UN74 947 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 PCDHGC5Q9Y5F6 944 aa10.94□□□□□ -0.66
COMMD4-203ENST00000480484 M0R2N6 131 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms