RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 FAM167AQ96KS9 214 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 PANK2Q9BZ23 570 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 FAM49AQ9H0Q0 323 aaPredicted RBP10.09□□□□□ -0.79
VCP-206ENST00000480327 IGFLR1Q9H665 355 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 CDHR5Q9HBB8 845 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 DDX19AQ9NUU7 478 aaKnown RBP10.09□□□□□ -0.79
VCP-206ENST00000480327 MUTYHQ9UIF7 546 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 RCOR1Q9UKL0 485 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 PADI3Q9ULW8 664 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 PCDHA7Q9UN72 937 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 MYO15AQ9UKN7 3530 aa10.09□□□□□ -0.79
VCP-206ENST00000480327 MYO10Q9HD67 2058 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 E9PMD0 336 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 MGEA5O60502 916 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 CUTAO60888 179 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 PPP6R2O75170 966 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 RBM10P98175 930 aaKnown RBP10.08□□□□□ -0.8
VCP-206ENST00000480327 NHLH1Q02575 133 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 KARSQ15046 597 aaKnown RBP10.08□□□□□ -0.8
VCP-206ENST00000480327 PAN2Q504Q3 1202 aaKnown RBP10.08□□□□□ -0.8
VCP-206ENST00000480327 ZNF484Q5JVG2 852 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 MTHFD1LQ6UB35 978 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 RNF135Q8IUD6 432 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 CMTR2Q8IYT2 770 aaKnown RBP10.08□□□□□ -0.8
VCP-206ENST00000480327 METTL13Q8N6R0 699 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 KLHL23Q8NBE8 558 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
VCP-206ENST00000480327 P2RX5Q93086 422 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 CDK5RAP3Q96JB5 506 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 CEP170P1Q96L14 293 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 AK8Q96MA6 479 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 FBXL18Q96ME1 805 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 CCDC43Q96MW1 224 aaKnown RBP10.08□□□□□ -0.8
VCP-206ENST00000480327 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 NACC1Q96RE7 527 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 PLVAPQ9BX97 442 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 NIFKQ9BYG3 293 aaKnown RBP10.08□□□□□ -0.8
VCP-206ENST00000480327 HCSTQ9UBK5 93 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 RWDD3Q9Y3V2 267 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 PCDHA2Q9Y5H9 948 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 TRPV2Q9Y5S1 764 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 STK24Q9Y6E0 443 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 SQORQ9Y6N5 450 aa10.08□□□□□ -0.8
VCP-206ENST00000480327 KDM3AQ9Y4C1 1321 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 ARID2Q68CP9 1835 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 DMDP11532 3685 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 CFAP54Q96N23 3096 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 COL1A2P08123 1366 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 NCK2O43639 380 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 LYPLA2O95372 231 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 EYA4O95677 639 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 SSBP05455 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
VCP-206ENST00000480327 PLCG1P19174 1290 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 TBC1D8BQ0IIM8 1120 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
VCP-206ENST00000480327 DHX8Q14562 1220 aaKnown RBP10.07□□□□□ -0.8
VCP-206ENST00000480327 TARBP2Q15633 366 aaKnown RBP10.07□□□□□ -0.8
VCP-206ENST00000480327 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
VCP-206ENST00000480327 AXDND1Q5T1B0 1012 aaPredicted RBP10.07□□□□□ -0.8
VCP-206ENST00000480327 SHC4Q6S5L8 630 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 KCNK18Q7Z418 384 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 RSPH3Q86UC2 560 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 NPAS4Q8IUM7 802 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 LRRC71Q8N4P6 559 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 PDILTQ8N807 584 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 VN1R2Q8NFZ6 395 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 TMEM40Q8WWA1 233 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 CALML4Q96GE6 196 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 PPP1R16BQ96T49 567 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 CELF4Q9BZC1 486 aaKnown RBP10.07□□□□□ -0.8
VCP-206ENST00000480327 SCAND2PQ9GZW5 306 aaPredicted RBP10.07□□□□□ -0.8
VCP-206ENST00000480327 CYP26B1Q9NR63 512 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 CD207Q9UJ71 328 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 ZDBF2Q9HCK1 2354 aa10.07□□□□□ -0.8
VCP-206ENST00000480327 PLXNA3P51805 1871 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 SMIM35A0A1B0GVV1 85 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 ARHGEF35A5YM69 484 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 LOC730098B7Z3J9 87 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 USO1O60763 962 aaKnown RBP10.06□□□□□ -0.8
VCP-206ENST00000480327 C22orf31O95567 290 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 TXLNAP40222 546 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 RARRES1P49788 294 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 MRE11P49959 708 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 CLCN3P51790 818 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 POLGP54098 1239 aaPredicted RBP10.06□□□□□ -0.8
VCP-206ENST00000480327 IER5Q5VY09 327 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 EFCAB12Q6NXP0 572 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 EFHBQ8N7U6 833 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 SMRP1Q8NCR6 262 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 LRRC15Q8TF66 581 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 POF1BQ8WVV4 589 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 ZNF668Q96K58 619 aaPredicted RBP10.06□□□□□ -0.8
VCP-206ENST00000480327 PHOX2BQ99453 314 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 BHMT2Q9H2M3 363 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 POLD4Q9HCU8 107 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 ERVK-5Q9HDB9 667 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 ANKEF1Q9NU02 776 aa10.06□□□□□ -0.8
VCP-206ENST00000480327 CCDC39Q9UFE4 941 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms