RNA–Protein interactions for RNA: ENST00000480289.1

ATP6V1C2-203, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 2

Gene ATP6V1C2, Length 385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-203ENST00000480289 CASD1Q96PB1 797 aa13□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PNMA5Q96PV4 448 aa13□□□□□ -0.33
ATP6V1C2-203ENST00000480289 C11orf84Q9BUA3 381 aaPredicted RBP13□□□□□ -0.33
ATP6V1C2-203ENST00000480289 TMEM117Q9H0C3 514 aa13□□□□□ -0.33
ATP6V1C2-203ENST00000480289 FAM105AQ9NUU6 356 aa13□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CLIC4Q9Y696 253 aa13□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PRRC2BQ5JSZ5 2229 aaKnown RBP13□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PRUNE2Q8WUY3 3088 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 INO80B-WBP1J3KQ70 363 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 SLC26A4O43511 780 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 TSPAN1O60635 241 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 RAB27AP51159 221 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PTPAQ15257 358 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 AMHR2Q16671 573 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PTPROQ16827 1216 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 NAALADL2Q58DX5 795 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CLLU1OSQ5K130 101 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 UBXN11Q5T124 520 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CDCA2Q69YH5 1023 aaPredicted RBP12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 LRRC55Q6ZSA7 311 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 RNF169Q8NCN4 708 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 BSNDQ8WZ55 320 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 P2RX5Q93086 422 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 MRPL38Q96DV4 380 aaKnown RBP12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 ZSCAN16Q9H4T2 348 aaPredicted RBP12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CWH43Q9H720 699 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 TYW1Q9NV66 732 aaKnown RBP12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PLAGL2Q9UPG8 496 aa12.99□□□□□ -0.33
ATP6V1C2-203ENST00000480289 LRRIQ4A6NIV6 560 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 GRM6O15303 877 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 ERLIN2O94905 339 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PDIA4P13667 645 aaKnown RBP12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 AXLP30530 894 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 GRIN1Q05586 938 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 NCBP1Q09161 790 aaKnown RBP12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 ZRSR1Q15695 479 aaKnown RBP12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 TMEM119Q4V9L6 283 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 RINT1Q6NUQ1 792 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 C1orf186Q6ZWK4 172 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 MRPL10Q7Z7H8 261 aaKnown RBP12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 ABI1Q8IZP0 508 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 KIFAP3Q92845 792 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PRDM6Q9NQX0 595 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PCDHB2Q9Y5E7 798 aa12.98□□□□□ -0.33
ATP6V1C2-203ENST00000480289 ITGB1P05556 798 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 HSP90AA1P07900 732 aaKnown RBP12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 ARF4P18085 180 aaPredicted RBP12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 UBA7P41226 1012 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 NAMPTP43490 491 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 NOTUMQ6P988 496 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CABP7Q86V35 215 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 SYT2Q8N9I0 419 aaPredicted RBP12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 KLHL23Q8NBE8 558 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 HELQQ8TDG4 1101 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 RSPH1Q8WYR4 309 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 LPPQ93052 612 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PGBD4Q96DM1 585 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CCDC51Q96ER9 411 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PLIN2Q99541 437 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 RUSC1Q9BVN2 902 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 LMAN2LQ9H0V9 348 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 C2orf40Q9H1Z8 148 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 FZD8Q9H461 694 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 POLD4Q9HCU8 107 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 ALG13Q9NP73 1137 aaKnown RBP12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 AAASQ9NRG9 546 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 HCSTQ9UBK5 93 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PCDHB12Q9Y5F1 795 aa12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 MORC2Q9Y6X9 1032 aaPredicted RBP12.97□□□□□ -0.33
ATP6V1C2-203ENST00000480289 COL4A4P53420 1690 aaPredicted RBP12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 UNC80Q8N2C7 3258 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 A0A1B0GUA9 196 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 MEIS3P2A8K0S8 358 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 B4GALT5O43286 388 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 OFD1O75665 1012 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 SLC12A3P55017 1021 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CAMK1Q14012 370 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PPP2R5AQ15172 486 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 FAM187BQ17R55 369 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 LONRF3Q496Y0 759 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 SPOUT1Q5T280 376 aaKnown RBP12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 AGMOQ6ZNB7 445 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 ZBTB8OSQ8IWT0 167 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 DAW1Q8N136 415 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 LRRC43Q8N309 656 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 SMG8Q8ND04 991 aaKnown RBP12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CNNM3Q8NE01 707 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 SPPL3Q8TCT6 385 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CPB2Q96IY4 423 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 CDK5RAP3Q96JB5 506 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 IFT74Q96LB3 600 aa12.96□□□□□ -0.33
ATP6V1C2-203ENST00000480289 PRIMPOLQ96LW4 560 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms