RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 ANAPC15P60006 121 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 CDC42EP1Q00587 391 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 RNASELQ05823 741 aaKnown RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 CTTNQ14247 550 aaKnown RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 SMC1AQ14683 1233 aaKnown RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 CBX2Q14781 532 aaPredicted RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 EMC2Q15006 297 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 ANKRD1Q15327 319 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 ANKRD54Q6NXT1 300 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 GLB1LQ6UWU2 654 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 TMEM173Q86WV6 379 aaPredicted RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 BCL7CQ8WUZ0 217 aaPredicted RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 PSPC1Q8WXF1 523 aaKnown RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 SUSD6Q92537 303 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 WASF1Q92558 559 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 GTF3C6Q969F1 213 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 TMEM169Q96HH4 297 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 DYDC2Q96IM9 177 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 NAP1L4Q99733 375 aaKnown RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 JPH2Q9BR39 696 aaPredicted RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 PHF7Q9BWX1 381 aaPredicted RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 NGRNQ9NPE2 291 aaKnown RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 CHST12Q9NRB3 414 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 TSHZ2Q9NRE2 1034 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 AGPAT5Q9NUQ2 364 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 FAM105AQ9NUU6 356 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 TBC1D13Q9NVG8 400 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 RGL1Q9NZL6 768 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 CDH22Q9UJ99 828 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 ARIH1Q9Y4X5 557 aaPredicted RBP7.47□□□□□ -1.21
FN1-220ENST00000480024 WDFY4Q6ZS81 3184 aa7.47□□□□□ -1.21
FN1-220ENST00000480024 C2orf71A6NGG8 1288 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 ZBTB39O15060 712 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 TBX3O15119 743 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 B4GALT3O60512 393 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 JAK2O60674 1132 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 BAG4O95429 457 aaKnown RBP7.46□□□□□ -1.22
FN1-220ENST00000480024 P4HBP07237 508 aaKnown RBP7.46□□□□□ -1.22
FN1-220ENST00000480024 SRGAP2CP0DJJ0 459 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 SKIP12755 728 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 FDPSP14324 419 aaKnown RBP7.46□□□□□ -1.22
FN1-220ENST00000480024 HOXD11P31277 338 aaPredicted RBP7.46□□□□□ -1.22
FN1-220ENST00000480024 SLC11A1P49279 550 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 RAB27AP51159 221 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 SPIRE1Q08AE8 756 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 LAMTOR4Q0VGL1 99 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 KCNC3Q14003 757 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 EPHA7Q15375 998 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 ME3Q16798 604 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 XKR9Q5GH70 373 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 NOMO2Q5JPE7 1267 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 SYCE2Q6PIF2 218 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 TPH2Q8IWU9 490 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 C4orf19Q8IY42 314 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 SLFN12Q8IYM2 578 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 VPS52Q8N1B4 723 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 RNF149Q8NC42 400 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 PRPF31Q8WWY3 499 aaKnown RBP7.46□□□□□ -1.22
FN1-220ENST00000480024 AUTS2Q8WXX7 1259 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 EDAQ92838 391 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 TNFRSF25Q93038 417 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 CCDC43Q96MW1 224 aaKnown RBP7.46□□□□□ -1.22
FN1-220ENST00000480024 MTRQ99707 1265 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 TRAIPQ9BWF2 469 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 S1PR5Q9H228 398 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 DHX33Q9H6R0 707 aaKnown RBP7.46□□□□□ -1.22
FN1-220ENST00000480024 NRDE2Q9H7Z3 1164 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 MINDY3Q9H8M7 445 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 IFT122Q9HBG6 1241 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 DNAJB4Q9UDY4 337 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 PCDHB2Q9Y5E7 798 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 HCFC2Q9Y5Z7 792 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 KMT2EQ8IZD2 1858 aa7.46□□□□□ -1.22
FN1-220ENST00000480024 TDRD15B5MCY1 1934 aaKnown RBP7.46□□□□□ -1.22
FN1-220ENST00000480024 DENND4AQ7Z401 1863 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 TMEM221A6NGB7 291 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 M0R296 226 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 WNT7AO00755 349 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 GAS2O43903 313 aaKnown RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 NEMFO60524 1076 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 CLASP2O75122 1294 aaKnown RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 OFD1O75665 1012 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 ERLIN2O94905 339 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 SSBP05455 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
FN1-220ENST00000480024 WEE2P0C1S8 567 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 HOXB8P17481 243 aaPredicted RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 AFF1P51825 1210 aaKnown RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 ZXDAP98168 799 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 TRIM29Q14134 588 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 CALCRLQ16602 461 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 TPRNQ4KMQ1 711 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 UBXN11Q5T124 520 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 RARS2Q5T160 578 aaKnown RBP7.45□□□□□ -1.22
FN1-220ENST00000480024 TMEM184AQ6ZMB5 413 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 TRIM67Q6ZTA4 783 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 OTUD6AQ7L8S5 288 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 SRGAP1Q7Z6B7 1085 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 ZBTB33Q86T24 672 aa7.45□□□□□ -1.22
FN1-220ENST00000480024 FERMT3Q86UX7 667 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms