RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 TDRD12Q587J7 1177 aaKnown RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 CMTR1Q8N1G2 835 aaKnown RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 DDX47Q9H0S4 455 aaKnown RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 OCEL1Q9H607 264 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 TDRD3Q9H7E2 651 aaKnown RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 MMRN2Q9H8L6 949 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 PREBQ9HCU5 417 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 USP40Q9NVE5 1235 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 SIK3Q9Y2K2 1263 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 IQCA1LA6NCM1 817 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 CCDC188H7C350 402 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 SMAPO00193 183 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 CEP104O60308 925 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 NUDT17P0C025 328 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 CCNE1P24864 410 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 KLRC1P26715 233 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 GSTT1P30711 240 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 EPHX2P34913 555 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 PTDSS1P48651 473 aaKnown RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 ENDOVQ8N8Q3 282 aaKnown RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 RBBP8NLQ8NC74 664 aaPredicted RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 GIMAP8Q8ND71 665 aaPredicted RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 ACTRT1Q8TDG2 376 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 UCMAQ8WVF2 138 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 P2RX5Q93086 422 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 UTP4Q969X6 686 aaKnown RBP11.72□□□□□ -0.53
CHD6-208ENST00000480022 NUDCD1Q96RS6 583 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
CHD6-208ENST00000480022 UNC5CO95185 931 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 AGTP01019 485 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 GBP5Q96PP8 586 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 FMO2Q99518 471 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 AP1M1Q9BXS5 423 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 SLITRK6Q9H5Y7 841 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 RRAGCQ9HB90 399 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 FGFR1OP2Q9NVK5 253 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.53
CHD6-208ENST00000480022 ASTN2O75129 1339 aaPredicted RBP11.71□□□□□ -0.54
CHD6-208ENST00000480022 CLRN2A0PK11 232 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 PRKAB2O43741 272 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 RHOBTB3O94955 611 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 PLCG2P16885 1265 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 DESP17661 470 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 CNGA2Q16280 664 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 PDXDC1Q6P996 788 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 ANKRD13AQ8IZ07 590 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 SEC14L1Q92503 715 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 DDX23Q9BUQ8 820 aaKnown RBP11.71□□□□□ -0.54
CHD6-208ENST00000480022 TXLNGYQ9BZA5 131 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 PPP1R12CQ9BZL4 782 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 TXLNGQ9NUQ3 528 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 ZSWIM5Q9P217 1185 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 ZNF70Q9UC06 446 aaPredicted RBP11.71□□□□□ -0.54
CHD6-208ENST00000480022 AMACRQ9UHK6 382 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 FRMD4BQ9Y2L6 1034 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 UTP11Q9Y3A2 253 aaKnown RBP11.71□□□□□ -0.54
CHD6-208ENST00000480022 WDR90Q96KV7 1748 aa11.71□□□□□ -0.54
CHD6-208ENST00000480022 PGRMC1O00264 195 aaKnown RBP11.7□□□□□ -0.54
CHD6-208ENST00000480022 LGR5O75473 907 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 CACNB3P54284 484 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 IFI35P80217 286 aaPredicted RBP11.7□□□□□ -0.54
CHD6-208ENST00000480022 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 DENND2CQ68D51 928 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 ANKRD40Q6AI12 368 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 CROCCP2Q86T23 111 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 CCDC84Q86UT8 332 aaPredicted RBP11.7□□□□□ -0.54
CHD6-208ENST00000480022 ARHGAP18Q8N392 663 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 PTPRN2Q92932 1015 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 TIPINQ9BVW5 301 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 DPH5Q9H2P9 285 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 PICK1Q9NRD5 415 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 SMIM23A6NLE4 172 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 TCP11X1B4DZS4 312 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 KRIT1O00522 736 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 NVLO15381 856 aaKnown RBP11.7□□□□□ -0.54
CHD6-208ENST00000480022 KLRC4O43908 158 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 CD151P48509 253 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 SERPINB4P48594 390 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 CACNA2D1P54289 1103 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 NLRP5P59047 1200 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 C6orf118Q5T5N4 469 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 USP50Q70EL3 339 aaPredicted RBP11.7□□□□□ -0.54
CHD6-208ENST00000480022 AGGF1Q8N302 714 aaeCLIP11.7□□□□□ -0.54
CHD6-208ENST00000480022 NEK9Q8TD19 979 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 SDR42E1Q8WUS8 393 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 BAP1Q92560 729 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 CRNKL1Q9BZJ0 848 aaKnown RBP11.7□□□□□ -0.54
CHD6-208ENST00000480022 ZMYND12Q9H0C1 365 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 STMN4Q9H169 189 aaPredicted RBP11.7□□□□□ -0.54
CHD6-208ENST00000480022 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 ZNF510Q9Y2H8 683 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 SLC4A4Q9Y6R1 1079 aa11.7□□□□□ -0.54
CHD6-208ENST00000480022 TTI1O43156 1089 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 VEGFAP15692 232 aaPredicted RBP11.69□□□□□ -0.54
CHD6-208ENST00000480022 NFIAQ12857 509 aa11.69□□□□□ -0.54
CHD6-208ENST00000480022 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms