RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 ZBTB9Q96C00 473 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 HINFPQ9BQA5 517 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 GOLPH3Q9H4A6 298 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 TSKSQ9UJT2 592 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 PTPRFP10586 1907 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 SRCAPQ6ZRS2 3230 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 OAS2P29728 719 aaKnown RBP14.15□□□□□ -0.14
SEC13-216ENST00000479868 ADSSP30520 456 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 GCLMP48507 274 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 DMTNQ08495 405 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 ARHGAP44Q17R89 818 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 SWSAP1Q6NVH7 229 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 VPS36Q86VN1 386 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 GLYCTKQ8IVS8 523 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 SLC30A5Q8TAD4 765 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 U2AF1L4Q8WU68 220 aaKnown RBP14.15□□□□□ -0.14
SEC13-216ENST00000479868 HDAC7Q8WUI4 952 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 CEP170P1Q96L14 293 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 LRRC1Q9BTT6 524 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 JPH1Q9HDC5 661 aaPredicted RBP14.15□□□□□ -0.14
SEC13-216ENST00000479868 ZCCHC17Q9NP64 241 aaKnown RBP14.15□□□□□ -0.14
SEC13-216ENST00000479868 HOXC10Q9NYD6 342 aa14.15□□□□□ -0.14
SEC13-216ENST00000479868 LOC285556D6RIA3 1793 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 GOLGA8IPA6NC78 632 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 GOLGA8JA6NMD2 632 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 ANKRD63C9JTQ0 380 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 MYBL2P10244 700 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 MRPS25P82663 173 aaKnown RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 DMP1Q13316 513 aaPredicted RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 CASP8Q14790 479 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 SUPT20HL1Q3ZLR7 823 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 CCDC60Q8IWA6 550 aaPredicted RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 SYT11Q9BT88 431 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 SLC9A2Q9UBY0 812 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 TBX20Q9UMR3 447 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 SNCAIPQ9Y6H5 919 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 PFASO15067 1338 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 MYH9P35579 1960 aaKnown RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 LRRIQ3A6PVS8 624 aaPredicted RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 H3BQF6 201 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 POLR3GO15318 223 aaPredicted RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 ADRB2P07550 413 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 LMNB1P20700 586 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 PAFAH1B1P43034 410 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 NOP2P46087 812 aaKnown RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 VGLL4Q14135 290 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 TREML2Q5T2D2 321 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 GSPT2Q8IYD1 628 aaKnown RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 ATP6V0A1Q93050 837 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 PDE11AQ9HCR9 933 aa14.14□□□□□ -0.15
SEC13-216ENST00000479868 RBM12Q9NTZ6 932 aaKnown RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 DMGDHQ9UI17 866 aaKnown RBP14.14□□□□□ -0.15
SEC13-216ENST00000479868 FOXN3O00409 490 aaPredicted RBP14.13□□□□□ -0.15
SEC13-216ENST00000479868 PSAPP07602 524 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 H2AFZP0C0S5 128 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 MCM3P25205 808 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 SMTNP53814 917 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 ACTR2P61160 394 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 SP2Q02086 613 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 FSTL1Q12841 308 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 EPC2Q52LR7 807 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 SH3D19Q5HYK7 790 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 H2AFVQ71UI9 128 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 OTUD6AQ7L8S5 288 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 CBWD2Q8IUF1 395 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 MAP4K3Q8IVH8 894 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 ARHGEF19Q8IW93 802 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 LRRC57Q8N9N7 239 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 SAAL1Q96ER3 474 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 IWS1Q96ST2 819 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 NFASCO94856 1347 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 SBF1O95248 1867 aa14.13□□□□□ -0.15
SEC13-216ENST00000479868 FAM170AA1A519 330 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 DENND3A2RUS2 1198 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 SPATA31C2B4DYI2 1134 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 CNGA1P29973 690 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 CNTN2Q02246 1040 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 PTPROQ16827 1216 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 CFAP221Q4G0U5 840 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 ABHD15Q6UXT9 468 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 SLC17A8Q8NDX2 589 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 UBE2TQ9NPD8 197 aaPredicted RBP14.12□□□□□ -0.15
SEC13-216ENST00000479868 KMT5AQ9NQR1 393 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 ATP8B3O60423 1300 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 MYPNQ86TC9 1320 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 OTOFQ9HC10 1997 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 TMCO5BA8MYB1 307 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 MAPK13O15264 365 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 DDNO94850 711 aaPredicted RBP14.12□□□□□ -0.15
SEC13-216ENST00000479868 GALCP54803 685 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 SNRPFP62306 86 aaKnown RBP14.12□□□□□ -0.15
SEC13-216ENST00000479868 SLC7A5Q01650 507 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 PRKCEQ02156 737 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 SNRNP35Q16560 246 aaKnown RBP14.12□□□□□ -0.15
SEC13-216ENST00000479868 SLC39A4Q6P5W5 647 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 CCNI2Q6ZMN8 369 aaPredicted RBP14.12□□□□□ -0.15
SEC13-216ENST00000479868 TPCN2Q8NHX9 752 aa14.12□□□□□ -0.15
SEC13-216ENST00000479868 KIFAP3Q92845 792 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms