RNA–Protein interactions for RNA: ENST00000479620.1

GRIK3-204, Transcript of glutamate ionotropic receptor kainate type subunit 3, human

TSL 3

Gene GRIK3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRIK3-204	ENST00000479620	BSND	Q8WZ55	320 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	SYMPK	Q92797	1274 aa	Known RBP	18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	TGS1	Q96RS0	853 aa	Known RBP	18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	C2orf40	Q9H1Z8	148 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	BLOC1S4	Q9NUP1	217 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	CFAP45	Q9UL16	551 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	PIN4	Q9Y237	131 aa	Known RBP	18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	MYO9B	Q13459	2157 aa		18.8	■□□□□ 0.6
GRIK3-204	ENST00000479620	ADGRA3	Q8IWK6	1321 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	LRRIQ4	A6NIV6	560 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	INO80B-WBP1	J3KQ70	363 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	ZNF623	O75123	536 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	SKI	P12755	728 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	PLCG1	P19174	1290 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	MAPK7	Q13164	816 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	AMHR2	Q16671	573 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	SPECC1	Q5M775	1068 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	ZNF598	Q86UK7	904 aa	Known RBP	18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	CMTR2	Q8IYT2	770 aa	Known RBP	18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	DAW1	Q8N136	415 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	LRRC15	Q8TF66	581 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	RAD54L	Q92698	747 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	IFT74	Q96LB3	600 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	DRC1	Q96MC2	740 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	SAMD11	Q96NU1	681 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	FZD8	Q9H461	694 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	C17orf75	Q9HAS0	396 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	CCDC39	Q9UFE4	941 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	STXBP5L	Q9Y2K9	1186 aa		18.79	■□□□□ 0.6
GRIK3-204	ENST00000479620	TSPAN1	O60635	241 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	HIP1R	O75146	1068 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	ERLIN2	O94905	339 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	DDIT3	P35638	169 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	TXLNA	P40222	546 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	RAB27A	P51159	221 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	NCBP1	Q09161	790 aa	Known RBP	18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	FAM187B	Q17R55	369 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	ARSH	Q5FYA8	562 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	TWF2	Q6IBS0	349 aa	Known RBP	18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	PPP4R3CP	Q6ZMV5	832 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	ZBTB8OS	Q8IWT0	167 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	FIBCD1	Q8N539	461 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	KCNG4	Q8TDN1	519 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	CLP1	Q92989	425 aa	Known RBP	18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	CCDC51	Q96ER9	411 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	PRIMPOL	Q96LW4	560 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	PRDM12	Q9H4Q4	367 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	KCNG1	Q9UIX4	513 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	RCOR1	Q9UKL0	485 aa		18.78	■□□□□ 0.6
GRIK3-204	ENST00000479620	HOXA2	O43364	376 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	CUTA	O60888	179 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	SSB	P05455	408 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	LINC00271	P0C7V0	271 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	ATF7	P17544	494 aa	Predicted RBP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	EFNA5	P52803	228 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	DNM1	Q05193	864 aa	Known RBP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	BTG3	Q14201	252 aa	Predicted RBP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	RASSF8	Q8NHQ8	419 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	MYLIP	Q8WY64	445 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	RSPH1	Q8WYR4	309 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	NTPCR	Q9BSD7	190 aa	Known RBP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	POLD4	Q9HCU8	107 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	FAM105A	Q9NUU6	356 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	PRMT7	Q9NVM4	692 aa	Predicted RBP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	STK17A	Q9UEE5	414 aa		18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	DAXX	Q9UER7	740 aa	Predicted RBP	18.77	■□□□□ 0.6
GRIK3-204	ENST00000479620	POU3F3	P20264	500 aa	Predicted RBP	18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	UBXN11	Q5T124	520 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	RRAGB	Q5VZM2	374 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	NOTUM	Q6P988	496 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	SPRED2	Q7Z698	418 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	MRPL10	Q7Z7H8	261 aa	Known RBP	18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	DEPTOR	Q8TB45	409 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	ARNTL2	Q8WYA1	636 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	LARP4B	Q92615	738 aa	Known RBP	18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	C17orf80	Q9BSJ5	609 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	TMEM117	Q9H0C3	514 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	CCDC113	Q9H0I3	377 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	RNF19A	Q9NV58	838 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	RWDD3	Q9Y3V2	267 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620	ATP6V1D	Q9Y5K8	247 aa		18.76	■□□□□ 0.59
GRIK3-204	ENST00000479620		A0A1B0GUA9	196 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	EPOP	A6NHQ4	379 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	ACKR2	O00590	384 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	ARF4	P18085	180 aa	Predicted RBP	18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	NPTX2	P47972	431 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	MCM6	Q14566	821 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	NAALADL2	Q58DX5	795 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	CCDC73	Q6ZRK6	1079 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	GPBP1	Q86WP2	473 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	TMEM192	Q8IY95	271 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	SPIRE2	Q8WWL2	714 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	GAS2L1	Q99501	681 aa	Predicted RBP	18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	CERS4	Q9HA82	394 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	ODF2L	Q9ULJ1	636 aa		18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	RBM19	Q9Y4C8	960 aa	Known RBP	18.75	■□□□□ 0.59
GRIK3-204	ENST00000479620	PCDHB2	Q9Y5E7	798 aa		18.75	■□□□□ 0.59

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