RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 C2CD4DB7Z1M9 353 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 GALR2O43603 387 aaPredicted RBP14.93□□□□□ -0.02
ABCF1-206ENST00000479542 GAS2O43903 313 aaKnown RBP14.93□□□□□ -0.02
ABCF1-206ENST00000479542 REC8O95072 547 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 PAPLNO95428 1278 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 PPP2R5CQ13362 524 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 DRP2Q13474 957 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 TWF2Q6IBS0 349 aaKnown RBP14.93□□□□□ -0.02
ABCF1-206ENST00000479542 C15orf39Q6ZRI6 1047 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 ANO5Q75V66 913 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 SRGAP1Q7Z6B7 1085 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 ZBTB33Q86T24 672 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 BLIDQ8IZY5 108 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 RNF169Q8NCN4 708 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 FDXACB1Q9BRP7 624 aaPredicted RBP14.93□□□□□ -0.02
ABCF1-206ENST00000479542 TMEM175Q9BSA9 504 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 IFT122Q9HBG6 1241 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 TBC1D13Q9NVG8 400 aa14.93□□□□□ -0.02
ABCF1-206ENST00000479542 SUCLA2Q9P2R7 463 aaPredicted RBP14.93□□□□□ -0.02
ABCF1-206ENST00000479542 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 ASAP2O43150 1006 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 LILRB3O75022 631 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 CPA1P15085 419 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 FGFR4P22455 802 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 SSRP1Q08945 709 aaKnown RBP14.92□□□□□ -0.02
ABCF1-206ENST00000479542 NPY5RQ15761 445 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 MTERF2Q49AM1 385 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 PPP4R3AQ6IN85 833 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 RUFY3Q7L099 469 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 GPR65Q8IYL9 337 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 CMASQ8NFW8 434 aaPredicted RBP14.92□□□□□ -0.02
ABCF1-206ENST00000479542 DHX33Q9H6R0 707 aaKnown RBP14.92□□□□□ -0.02
ABCF1-206ENST00000479542 ZSWIM6Q9HCJ5 1215 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 UBN1Q9NPG3 1134 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 AGPAT5Q9NUQ2 364 aa14.92□□□□□ -0.02
ABCF1-206ENST00000479542 SEPT9Q9UHD8 586 aaPredicted RBP14.92□□□□□ -0.02
ABCF1-206ENST00000479542 DDX11L8A8MPP1 907 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 NT5C1B-RDH14C9J2C7 533 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 TBX3O15119 743 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 INPPL1O15357 1258 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 CHMP2AO43633 222 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 ZC3H11AO75152 810 aaKnown RBP eCLIP14.91□□□□□ -0.02
ABCF1-206ENST00000479542 BRD1O95696 1058 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 ALDH2P05091 517 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 P4HBP07237 508 aaKnown RBP14.91□□□□□ -0.02
ABCF1-206ENST00000479542 GCFC2P16383 781 aaKnown RBP14.91□□□□□ -0.02
ABCF1-206ENST00000479542 QARSP47897 775 aaKnown RBP14.91□□□□□ -0.02
ABCF1-206ENST00000479542 POU5F1BQ06416 359 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 KRT25Q7Z3Z0 450 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 GPR149Q86SP6 731 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 RHPN2Q8IUC4 686 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 C4orf19Q8IY42 314 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 TDRD5Q8NAT2 981 aaKnown RBP14.91□□□□□ -0.02
ABCF1-206ENST00000479542 TMEM87AQ8NBN3 555 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 TM6SF1Q9BZW5 370 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 SFXN1Q9H9B4 322 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 KCNMB3Q9NPA1 279 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 CYP26B1Q9NR63 512 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 PIN4Q9Y237 131 aaKnown RBP14.91□□□□□ -0.02
ABCF1-206ENST00000479542 SSX2IPQ9Y2D8 614 aa14.91□□□□□ -0.02
ABCF1-206ENST00000479542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 CSDE1O75534 798 aaKnown RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 RFC5P40937 340 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 NBL1P41271 181 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 NONOQ15233 471 aaKnown RBP eCLIP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 PTPN14Q15678 1187 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 ASTLQ6HA08 431 aaPredicted RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 CPLX2Q6PUV4 134 aaKnown RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 AGMOQ6ZNB7 445 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 OTOP3Q7RTS5 596 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 CATSPER4Q7RTX7 472 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 CABP7Q86V35 215 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 TMEM173Q86WV6 379 aaPredicted RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 URGCPQ8TCY9 931 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 SLC7A3Q8WY07 619 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 ATOH1Q92858 354 aaPredicted RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 ACSF2Q96CM8 615 aaPredicted RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 ZNF668Q96K58 619 aaPredicted RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 NAP1L4Q99733 375 aaKnown RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 APOL5Q9BWW9 433 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 EMILIN2Q9BXX0 1053 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 DAXXQ9UER7 740 aaPredicted RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 DDX25Q9UHL0 483 aaKnown RBP14.9□□□□□ -0.02
ABCF1-206ENST00000479542 DPP7Q9UHL4 492 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 PCDHB2Q9Y5E7 798 aa14.9□□□□□ -0.02
ABCF1-206ENST00000479542 GFRA3O60609 400 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 TDP2O95551 362 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 EFEMP2O95967 443 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 NEFLP07196 543 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 EPCAMP16422 314 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 AXLP30530 894 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 HOXA11P31270 313 aaPredicted RBP14.89□□□□□ -0.03
ABCF1-206ENST00000479542 SLC11A1P49279 550 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 CLCN4P51793 760 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 CCT2P78371 535 aaKnown RBP14.89□□□□□ -0.03
ABCF1-206ENST00000479542 FOXK2Q01167 660 aa14.89□□□□□ -0.03
ABCF1-206ENST00000479542 RNASELQ05823 741 aaKnown RBP14.89□□□□□ -0.03
ABCF1-206ENST00000479542 TOB2Q14106 344 aaPredicted RBP14.89□□□□□ -0.03
ABCF1-206ENST00000479542 RARS2Q5T160 578 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms